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MELO3C035607 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035607
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr12:13257900..13260219
RNA-Seq ExpressionMELO3C035607
SyntenyMELO3C035607
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001388 - Synaptobrevin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026115.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-2846.3Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +Q Q+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL++EL   PQP+   CTD RW+CFE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-2846.91Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL+DEL   PQP+   CTD RW+ FE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-2846.91Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL+DEL   PQP+   CTD RW+ FE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

KAA0048364.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-2944.71Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFEAQNFRTQR
        L I  H V                          V+RL++EL   PQP+   CTD RW+C      ++QR
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFEAQNFRTQR

KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-2946.91Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL++EL   PQP+   CTD RW+CFE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

TrEMBL top hitse value%identityAlignment
A0A5A7SNV3 Retrotransposon protein5.1e-2946.3Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +Q Q+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL++EL   PQP+   CTD RW+CFE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

A0A5A7SWD8 Retrotransposon protein5.1e-2946.91Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL+DEL   PQP+   CTD RW+ FE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

A0A5A7TXW1 Retrotransposon protein5.1e-2946.91Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL+DEL   PQP+   CTD RW+ FE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

A0A5A7TZ93 Retrotransposon protein3.0e-2944.71Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFEAQNFRTQR
        L I  H V                          V+RL++EL   PQP+   CTD RW+C      ++QR
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFEAQNFRTQR

A0A5A7VG29 Retrotransposon protein7.9e-3046.91Show/hide
Query:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S
        MD HE+A++V+AFI +QRQ+LL+LE L +D KR THIP + RHRIRQL YF MIH SDLVCR+STRMDRRCFAI CH+ R                    
Subjt:  MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRD------------------S

Query:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE
        L I  H V                          V+RL++EL   PQP+   CTD RW+CFE
Subjt:  LPIFQHGVD------------------------VVLRLYDELFAIPQPITRGCTDMRWQCFE

SwissProt top hitse value%identityAlignment
O23429 Vesicle-associated membrane protein 7244.5e-0652.08Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ ++ Q T+VRRK+W+QNMKIKL+ L  ++ L+LII + V H F C
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

O48850 Vesicle-associated membrane protein 7251.5e-0968.75Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRTQ TK+RRKMWF+NMKIKLI L  ++ LILIIIL V   FKC
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

P47192 Vesicle-associated membrane protein 7227.4e-0966.67Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRTQ T++RRKMWFQNMKIKLI L  ++ALILIIIL +   F C
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

Q9MAS5 Putative vesicle-associated membrane protein 7266.7e-1068.75Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRTQ TK++RK+WF+NMKIKLI    +VALILIIIL V H FKC
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

Q9ZTW3 Vesicle-associated membrane protein 7213.3e-0966.67Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRT  T++RRKMW QNMKIKLI L  ++ALILII+L V H FKC
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

Arabidopsis top hitse value%identityAlignment
AT1G04750.1 vesicle-associated membrane protein 7212.3e-1066.67Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRT  T++RRKMW QNMKIKLI L  ++ALILII+L V H FKC
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

AT1G04750.2 vesicle-associated membrane protein 7212.3e-1066.67Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRT  T++RRKMW QNMKIKLI L  ++ALILII+L V H FKC
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

AT1G04760.1 vesicle-associated membrane protein 7264.7e-1168.75Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRTQ TK++RK+WF+NMKIKLI    +VALILIIIL V H FKC
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

AT2G32670.1 vesicle-associated membrane protein 7251.1e-1068.75Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRTQ TK+RRKMWF+NMKIKLI L  ++ LILIIIL V   FKC
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC

AT2G33120.1 synaptobrevin-related protein 15.2e-1066.67Show/hide
Query:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC
        +AQ+FRTQ T++RRKMWFQNMKIKLI L  ++ALILIIIL +   F C
Subjt:  EAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCACACGAAATCGCCGCTGTTGTATCTGCATTTATAATAGCGCAACGACAAATGCTCCTAATATTAGAGGCACTGTTGCATGATAATAAGCGCAAAACTCACAT
CCCGGCCGATGCAAGACATAGGATTAGGCAACTAACGTACTTTTGCATGATACATGCGTCTGACCTAGTGTGTCGGGAAAGTACGCGAATGGACAGACGCTGCTTTGCAA
TTTTCTGCCATGTTGGGCGAGACAGTCTCCCAATATTTCAACATGGTGTTGATGTCGTTCTTCGACTGTATGACGAGTTATTTGCCATACCACAACCTATAACGAGGGGA
TGCACAGACATGAGGTGGCAGTGTTTCGAGGCTCAGAATTTCAGGACACAGAGAACTAAAGTGAGGAGGAAGATGTGGTTTCAGAATATGAAAATAAAATTGATCGGTCT
CGATAGTGTTGTTGCCTTGATTCTCATCATTATTTTGTTCGTCTGGCACGACTTTAAATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCACACGAAATCGCCGCTGTTGTATCTGCATTTATAATAGCGCAACGACAAATGCTCCTAATATTAGAGGCACTGTTGCATGATAATAAGCGCAAAACTCACAT
CCCGGCCGATGCAAGACATAGGATTAGGCAACTAACGTACTTTTGCATGATACATGCGTCTGACCTAGTGTGTCGGGAAAGTACGCGAATGGACAGACGCTGCTTTGCAA
TTTTCTGCCATGTTGGGCGAGACAGTCTCCCAATATTTCAACATGGTGTTGATGTCGTTCTTCGACTGTATGACGAGTTATTTGCCATACCACAACCTATAACGAGGGGA
TGCACAGACATGAGGTGGCAGTGTTTCGAGGCTCAGAATTTCAGGACACAGAGAACTAAAGTGAGGAGGAAGATGTGGTTTCAGAATATGAAAATAAAATTGATCGGTCT
CGATAGTGTTGTTGCCTTGATTCTCATCATTATTTTGTTCGTCTGGCACGACTTTAAATGTTAA
Protein sequenceShow/hide protein sequence
MDPHEIAAVVSAFIIAQRQMLLILEALLHDNKRKTHIPADARHRIRQLTYFCMIHASDLVCRESTRMDRRCFAIFCHVGRDSLPIFQHGVDVVLRLYDELFAIPQPITRG
CTDMRWQCFEAQNFRTQRTKVRRKMWFQNMKIKLIGLDSVVALILIIILFVWHDFKC