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MELO3C035681 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035681
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag-protease polyprotein
Genome locationchr12:18129662..18133847
RNA-Seq ExpressionMELO3C035681
SyntenyMELO3C035681
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038832.1 pol protein [Cucumis melo var. makuwa]8.6e-0972.34Show/hide
Query:  VKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLRLNKL
        VKVMYEADRRG R++REGH+ MSSFNAS QCLC F FE+F L+  KL
Subjt:  VKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLRLNKL
KAA0061928.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.2e-0562.75Show/hide
Query:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
        LT LL  +VKVMYEADR+G RR+REGH  MSSF AS    CCF FE+F  +
Subjt:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
TYK24001.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.2e-0562.75Show/hide
Query:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
        LT LL  +VKVMYEADR+G RR+REGH  MSSF AS    CCF FE+F  +
Subjt:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
TrEMBL top hitse value%identityAlignment
A0A5A7T5S4 Pol protein4.2e-0972.34Show/hide
Query:  VKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLRLNKL
        VKVMYEADRRG R++REGH+ MSSFNAS QCLC F FE+F L+  KL
Subjt:  VKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLRLNKL
A0A5A7V2W6 Gag-protease polyprotein5.6e-0662.75Show/hide
Query:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
        LT LL  +VKVMYEADR+G RR+REGH  MSSF AS    CCF FE+F  +
Subjt:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
A0A5D3DK05 Gag-protease polyprotein5.6e-0662.75Show/hide
Query:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
        LT LL  +VKVMYEADR+G RR+REGH  MSSF AS    CCF FE+F  +
Subjt:  LTALL--VVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTGAAACTAGTCACAAACTCAGTTTCTCTTCATGTCACGTGTCCGAGCCGGAGCAAGTCAACTTCGAAGTTGGCCGTGATGTTTTCCTCCATCGTTGCACGCCA
TCGGTTGCGTCACTCTTCATCCGCCACTGATGATGTCTTCATCAAGTTCCATTTTCCATCACCGTTGCGAGCCGCATCCGAGCCTCTCCCCCAAACGTCTAAGCCGAGTC
GATTGCCCCCTTCCTTTTGTTTAGCCAAGCTACTAGTGACCCAAGTTGAGCCACTTTTATGGGGTTTTAGAAATTGTGTAATACCCCAAAATTTTAAGGAAGTGCCCCCA
CCCCGTTTCCAATCTCCTCCTTTCGAAGTTGTCGCTGTCGTCAAGGTTCCCCCTCCTCATCCGTCGTCGTCTCTTCGTCCGCAAAAGCTACTAACGGTCTCCGTCTCTTC
GTCCGTGCAAGCAGCCATTGGTCATTATCCCCGTCCGCGCGTCCAGTTTGTCGTTGCCCGTCGAATTTCAGAACTCACTGCCTTACTCGTCGTAAAGGTAATGTACGAGG
CAGACCGACGAGGGGTAAGAAGGATACGTGAAGGCCATTTGAGAATGTCTAGTTTTAATGCTTCCGCTCAATGTCTTTGCTGTTTTCGTTTTGAGGATTTTAATTTAAGA
CTGAATAAATTGCAGATTTACTGTCAACCAAAGAATTATTATCTGTTTGCTAATATTGAGGCAGAGTTAAGAGGTTTCAATGTTGTGACAGTCAAAACCAAGAAAAAGTC
TTTATCTCACGAACGATTAATTAATTGA
mRNA sequenceShow/hide mRNA sequence
AGTGTCGCCGTCACTAGCTTCGTTCGTCACCGACTAACTTGCTGTCTACCTTCCGCCATCAAGCAGCATCGTCCAGTCGTCCGTCGTGCTATGCCATTGAAACTAGTCAC
AAACTCAGTTTCTCTTCATGTCACGTGTCCGAGCCGGAGCAAGTCAACTTCGAAGTTGGCCGTGATGTTTTCCTCCATCGTTGCACGCCATCGGTTGCGTCACTCTTCAT
CCGCCACTGATGATGTCTTCATCAAGTTCCATTTTCCATCACCGTTGCGAGCCGCATCCGAGCCTCTCCCCCAAACGTCTAAGCCGAGTCGATTGCCCCCTTCCTTTTGT
TTAGCCAAGCTACTAGTGACCCAAGTTGAGCCACTTTTATGGGGTTTTAGAAATTGTGTAATACCCCAAAATTTTAAGGAAGTGCCCCCACCCCGTTTCCAATCTCCTCC
TTTCGAAGTTGTCGCTGTCGTCAAGGTTCCCCCTCCTCATCCGTCGTCGTCTCTTCGTCCGCAAAAGCTACTAACGGTCTCCGTCTCTTCGTCCGTGCAAGCAGCCATTG
GTCATTATCCCCGTCCGCGCGTCCAGTTTGTCGTTGCCCGTCGAATTTCAGAACTCACTGCCTTACTCGTCGTAAAGGTAATGTACGAGGCAGACCGACGAGGGGTAAGA
AGGATACGTGAAGGCCATTTGAGAATGTCTAGTTTTAATGCTTCCGCTCAATGTCTTTGCTGTTTTCGTTTTGAGGATTTTAATTTAAGACTGAATAAATTGCAGATTTA
CTGTCAACCAAAGAATTATTATCTGTTTGCTAATATTGAGGCAGAGTTAAGAGGTTTCAATGTTGTGACAGTCAAAACCAAGAAAAAGTCTTTATCTCACGAACGATTAA
TTAATTGA
Protein sequenceShow/hide protein sequence
MPLKLVTNSVSLHVTCPSRSKSTSKLAVMFSSIVARHRLRHSSSATDDVFIKFHFPSPLRAASEPLPQTSKPSRLPPSFCLAKLLVTQVEPLLWGFRNCVIPQNFKEVPP
PRFQSPPFEVVAVVKVPPPHPSSSLRPQKLLTVSVSSSVQAAIGHYPRPRVQFVVARRISELTALLVVKVMYEADRRGVRRIREGHLRMSSFNASAQCLCCFRFEDFNLR
LNKLQIYCQPKNYYLFANIEAELRGFNVVTVKTKKKSLSHERLIN