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MELO3C035690 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035690
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr12:18616767..18617134
RNA-Seq ExpressionMELO3C035690
SyntenyMELO3C035690
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032340.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.2e-2772.34Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLLTLE LMN+N+R P+TP +TRHRIRQL YFHMIHESD + RQSTHM+  TF ILCHLL+ VA LSS EIVNVE+MV MFLHVLA+ V N  I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

KAA0036563.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-2773.4Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        +LLTLE LMNDN+R  YTP +TRHRIRQL YF MIHESD + RQST M+R TFAILCHLL+TV+SLSS EIV+VE+MV MFLHVLA+ VKN +I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

KAA0042481.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.3e-2875.53Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLLTLE LMNDN+R P TPY+TRHRIRQL YF MIHE D + RQSTHM+R TFAILCHLL+ VA LSS EIVNVE+MV MFLHVLA+ VKN +I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

KAA0043030.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-2772.34Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLL LEALMNDN+R P TPY+TRHRIRQL YF MIHESD + R+ST M+R TF ILCHLL+TV+ LSS EIV+VE+MV MFLHVLA+ VKN +I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

TYK19044.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.2e-2772.34Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLLTLE LMN+N+R P+TP +TRHRIRQL YFHMIHESD + RQSTHM+  TF ILCHLL+ VA LSS EIVNVE+MV MFLHVLA+ V N  I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

TrEMBL top hitse value%identityAlignment
A0A5A7SNH9 Putative nuclease HARBI13.5e-2772.34Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLLTLE LMN+N+R P+TP +TRHRIRQL YFHMIHESD + RQSTHM+  TF ILCHLL+ VA LSS EIVNVE+MV MFLHVLA+ V N  I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

A0A5A7T0Z8 Retrotransposon protein1.6e-2773.4Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        +LLTLE LMNDN+R  YTP +TRHRIRQL YF MIHESD + RQST M+R TFAILCHLL+TV+SLSS EIV+VE+MV MFLHVLA+ VKN +I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

A0A5A7TI78 Retrotransposon protein1.6e-2772.34Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLL LEALMNDN+R P TPY+TRHRIRQL YF MIHESD + R+ST M+R TF ILCHLL+TV+ LSS EIV+VE+MV MFLHVLA+ VKN +I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

A0A5A7TLM6 Putative nuclease HARBI16.4e-2975.53Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLLTLE LMNDN+R P TPY+TRHRIRQL YF MIHE D + RQSTHM+R TFAILCHLL+ VA LSS EIVNVE+MV MFLHVLA+ VKN +I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

A0A5D3D656 Putative nuclease HARBI13.5e-2772.34Show/hide
Query:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII
        MLLTLE LMN+N+R P+TP +TRHRIRQL YFHMIHESD + RQSTHM+  TF ILCHLL+ VA LSS EIVNVE+MV MFLHVLA+ V N  I
Subjt:  MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTAACGTTGGAGGCATTGATGAACGACAATCAGCGTTTTCCATATACACCGTACAATACTAGGCATAGAATTAGGCAGCTTGTGTACTTTCACATGATACACGA
GTCTGATCCTTTGTCTCGACAAAGCACGCACATGAATAGGTTAACATTCGCTATTCTATGCCATTTACTTAAGACTGTCGCTAGCCTTTCGTCAATAGAGATTGTCAATG
TTGAGAAGATGGTTGTCATGTTCTTGCACGTCCTTGCCTATGTCGTGAAGAATCACATTATTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTAGGTACTTTGAAATGGATCAACAAACCCTTCTTGGAGCTTCTTGGAGTCCTAACTGTGTTCACACTAGTCCAACGTCAGATGCTCCTAACGTTGGAGGCATTGATG
AACGACAATCAGCGTTTTCCATATACACCGTACAATACTAGGCATAGAATTAGGCAGCTTGTGTACTTTCACATGATACACGAGTCTGATCCTTTGTCTCGACAAAGCAC
GCACATGAATAGGTTAACATTCGCTATTCTATGCCATTTACTTAAGACTGTCGCTAGCCTTTCGTCAATAGAGATTGTCAATGTTGAGAAGATGGTTGTCATGTTCTTGC
ACGTCCTTGCCTATGTCGTGAAGAATCACATTATTTAA
Protein sequenceShow/hide protein sequence
MLLTLEALMNDNQRFPYTPYNTRHRIRQLVYFHMIHESDPLSRQSTHMNRLTFAILCHLLKTVASLSSIEIVNVEKMVVMFLHVLAYVVKNHII