; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C035691 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035691
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr12:18701416..18702404
RNA-Seq ExpressionMELO3C035691
SyntenyMELO3C035691
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]5.4e-2780.72Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        DF+PMYSQ LNMSPDELMG R A VS+GRYVSSGSKRKR GQA DSGD++RTAIEY NEQLN IA+W +LQRQDASQT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

KAA0038320.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-2678.31Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        D  PMYSQ LNMSPDEL+GTR   V++GRY+SSGSK KRGGQA DSGD+ RTAIEY NEQLNRIA+W VLQRQDASQT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]4.9e-2880.72Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        DF+PMYS+ LNMSPDELMGTR A VS+GRYVSSGSK+KRGG  +DSGDI+RTAIEY NEQLNRIA+W VLQRQDA+QT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

KAA0063768.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-43100Show/hide
Query:  MDFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVVDSWRPSLS
        MDFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVVDSWRPSLS
Subjt:  MDFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVVDSWRPSLS

TYK10954.1 retrotransposon protein [Cucumis melo var. makuwa]7.8e-2679.52Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        DF PMYSQ LNMSPD+LMGTR A VS+ R VSSGSKRKR G A DSGDI+RTAIEY NEQLNRIA+W VLQRQ+ASQT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein2.6e-2780.72Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        DF+PMYSQ LNMSPDELMG R A VS+GRYVSSGSKRKR GQA DSGD++RTAIEY NEQLN IA+W +LQRQDASQT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

A0A5A7T4M9 Retrotransposon protein1.0e-2678.31Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        D  PMYSQ LNMSPDEL+GTR   V++GRY+SSGSK KRGGQA DSGD+ RTAIEY NEQLNRIA+W VLQRQDASQT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

A0A5A7TZA5 Retrotransposon protein2.4e-2880.72Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        DF+PMYS+ LNMSPDELMGTR A VS+GRYVSSGSK+KRGG  +DSGDI+RTAIEY NEQLNRIA+W VLQRQDA+QT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

A0A5A7VBC5 Retrotransposon protein3.8e-2679.52Show/hide
Query:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV
        DF PMYSQ LNMSPD+LMGTR A VS+ R VSSGSKRKR G A DSGDI+RTAIEY NEQLNRIA+W VLQRQ+ASQT QEVV
Subjt:  DFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVV

A0A5D3C2D3 Retrotransposon protein2.0e-43100Show/hide
Query:  MDFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVVDSWRPSLS
        MDFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVVDSWRPSLS
Subjt:  MDFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVVDSWRPSLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCCGGCCAATGTACAGTCAGAGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAGCTGCTGGGGTAAGTAAAGGTAGGTATGTTTCGAGCGGG
TCTAAGCGAAAACGTGGAGGACAGGCCGTAGACAGTGGGGACATAATTCGCACTGCGATTGAGTACGAAAATGAACAACTAAACCGCATTGCTAAATGGCTTGTC
CTACAACGTCAAGACGCAAGCCAAACATGTCAAGAGGTTGTCGACAGTTGGAGGCCATCCCTGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCATCGAGACTACTTAAGCAATATTGGACTAAAGAGGAAGAGGCAGGCCTCATCGAGCGTCTCGTGGAAGTCATCCGGCGGCCAAGGGCCTCCTTA
ATAAGTCGTTTCCCACTATGACGAACTGTCGTACGTGTCTGGCAAAGATCGTGCAACGGGAGGCCGGGTTGAGACTTTTACGGACGTTGGGTCAAACGATCCTAC
TGGGTACGATGCATTTGCCACTGACGCTGCATTAGATATGGACTTCCGGCCAATGTACAGTCAGAGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAGC
TGCTGGGGTAAGTAAAGGTAGGTATGTTTCGAGCGGGTCTAAGCGAAAACGTGGAGGACAGGCCGTAGACAGTGGGGACATAATTCGCACTGCGATTGAGTACGA
AAATGAACAACTAAACCGCATTGCTAAATGGCTTGTCCTACAACGTCAAGACGCAAGCCAAACATGTCAAGAGGTTGTCGACAGTTGGAGGCCATCCCTGAGCTG
ACATTGATGGATAGGTGTCGCTTAATGTGTATACTTATGCGTAACGTCGATGACATGAAAGCTTTCCTTGACGTTCCCGACAATATGAAGTACCCATACTGCACC
ATCATTCTTGAAGAAAACTGA
Protein sequenceShow/hide protein sequence
MDFRPMYSQRLNMSPDELMGTRAAGVSKGRYVSSGSKRKRGGQAVDSGDIIRTAIEYENEQLNRIAKWLVLQRQDASQTCQEVVDSWRPSLS