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MELO3C035704 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035704
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptiontRNA-5-taurinomethyluridine 2-sulfurtransferase
Genome locationchr12:19695810..19698329
RNA-Seq ExpressionMELO3C035704
SyntenyMELO3C035704
Gene Ontology termsGO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR014729 - Rossmann-like alpha/beta/alpha sandwich fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP98782.1 tRNA-specific 2-thiouridylase mnma [Phtheirospermum japonicum]1.8e-1140.74Show/hide
Query:  LVVGYPEDFEKFWSKCSWDDDLKYAKAVCDH-------------------------------------------------VKDQTYFLSHLSQNQLKRLL
        L + + EDFE FWS+C W++DLKYAKAVCD                                                  VKDQTYFLSHLSQ+QLK L+
Subjt:  LVVGYPEDFEKFWSKCSWDDDLKYAKAVCDH-------------------------------------------------VKDQTYFLSHLSQNQLKRLL

Query:  FPLGCIPK
        FPLGCI K
Subjt:  FPLGCIPK

KAE9463251.1 hypothetical protein C3L33_04838, partial [Rhododendron williamsianum]7.2e-1659.46Show/hide
Query:  EDFEKFWSKCSWDDDLKYAKAVCDH------------------VKDQTYFLSHLSQNQLKRLLFPLGCIPKLRY
        EDFE FWS+C W++DLKYAK VC+                   VKDQTYFLSHLSQ+QLKRL+FPLGCIPK+R+
Subjt:  EDFEKFWSKCSWDDDLKYAKAVCDH------------------VKDQTYFLSHLSQNQLKRLLFPLGCIPKLRY

RRT63170.1 hypothetical protein B296_00042876 [Ensete ventricosum]4.6e-1550.56Show/hide
Query:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY
        PEDFE FWS+C WD+DLKYA+AVCD V                                KDQTYFLSHLSQ+QLKRLLFPLGC+ K+++
Subjt:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY

RWW14291.1 hypothetical protein GW17_00021947 [Ensete ventricosum]4.6e-1550.56Show/hide
Query:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY
        PEDFE FWS+C WD+DLKYA+AVCD V                                KDQTYFLSHLSQ+QLKRLLFPLGC+ K+++
Subjt:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY

RWW67338.1 hypothetical protein BHE74_00025214 [Ensete ventricosum]4.6e-1550.56Show/hide
Query:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY
        PEDFE FWS+C WD+DLKYA+AVCD V                                KDQTYFLSHLSQ+QLKRLLFPLGC+ K+++
Subjt:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY

TrEMBL top hitse value%identityAlignment
A0A0D3FEH8 tRNA-5-taurinomethyluridine 2-sulfurtransferase3.0e-1242.06Show/hide
Query:  LVVGYPEDFEKFWSKCSWDDDLKYAKAVC------------------------------------------------DHVKDQTYFLSHLSQNQLKRLLF
        L + + EDF  FWS+C WDDDLKYA+AVC                                                D VKDQTYFLSHLSQ QL+RLLF
Subjt:  LVVGYPEDFEKFWSKCSWDDDLKYAKAVC------------------------------------------------DHVKDQTYFLSHLSQNQLKRLLF

Query:  PLGCIPK
        PLGCI K
Subjt:  PLGCIPK

A0A426ZGQ9 tRNA-5-taurinomethyluridine 2-sulfurtransferase2.2e-1550.56Show/hide
Query:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY
        PEDFE FWS+C WD+DLKYA+AVCD V                                KDQTYFLSHLSQ+QLKRLLFPLGC+ K+++
Subjt:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY

A0A444EVC8 Uncharacterized protein2.2e-1550.56Show/hide
Query:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY
        PEDFE FWS+C WD+DLKYA+AVCD V                                KDQTYFLSHLSQ+QLKRLLFPLGC+ K+++
Subjt:  PEDFEKFWSKCSWDDDLKYAKAVCDHV--------------------------------KDQTYFLSHLSQNQLKRLLFPLGCIPKLRY

A0A6A4M3X7 Uncharacterized protein (Fragment)3.5e-1659.46Show/hide
Query:  EDFEKFWSKCSWDDDLKYAKAVCDH------------------VKDQTYFLSHLSQNQLKRLLFPLGCIPKLRY
        EDFE FWS+C W++DLKYAK VC+                   VKDQTYFLSHLSQ+QLKRL+FPLGCIPK+R+
Subjt:  EDFEKFWSKCSWDDDLKYAKAVCDH------------------VKDQTYFLSHLSQNQLKRLLFPLGCIPKLRY

K7LPK6 tRNA-5-taurinomethyluridine 2-sulfurtransferase4.2e-1460Show/hide
Query:  DFEKFWSKCSWDDDLKYAKAVCDH------------------VKDQTYFLSHLSQNQLKRLLFPLGCIPK
        +FE FWS+C W+DDLKYAK VC+                   VKDQTYFLSHLSQ+QLK+LLFPLGCIPK
Subjt:  DFEKFWSKCSWDDDLKYAKAVCDH------------------VKDQTYFLSHLSQNQLKRLLFPLGCIPK

SwissProt top hitse value%identityAlignment
B3R6Q0 tRNA-specific 2-thiouridylase MnmA1.7e-0468.75Show/hide
Query:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR
        DH KDQ+YFL  L+Q QL R LFPLG IPK R
Subjt:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR

Q0K720 tRNA-specific 2-thiouridylase MnmA1.7e-0468.75Show/hide
Query:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR
        DH KDQ+YFL  L+Q QL R LFPLG IPK R
Subjt:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR

Q0SMH1 tRNA-specific 2-thiouridylase MnmA7.7e-0546.81Show/hide
Query:  WSKCSWDDDLKYAKAVCDHVKDQTYFLSHLSQNQLKRLLFPLGCIPK
        ++K    D   + K   D +KDQ+YFLSHLSQ Q+ +L FPLG + K
Subjt:  WSKCSWDDDLKYAKAVCDHVKDQTYFLSHLSQNQLKRLLFPLGCIPK

Q1LJ45 tRNA-specific 2-thiouridylase MnmA1.7e-0468.75Show/hide
Query:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR
        DH KDQ+YFL  L+Q QL R LFPLG IPK R
Subjt:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR

Q46XF1 tRNA-specific 2-thiouridylase MnmA1.7e-0468.75Show/hide
Query:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR
        DH KDQ+YFL  L+Q QL R LFPLG IPK R
Subjt:  DHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLR

Arabidopsis top hitse value%identityAlignment
AT1G51310.1 transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases2.8e-1029.45Show/hide
Query:  LVVGYPEDFEKFWSKCSWDDDLKYAKAVC-----------------------------------------------------------------------
        L + + E FE FW++C W+DDLKYAK VC                                                                       
Subjt:  LVVGYPEDFEKFWSKCSWDDDLKYAKAVC-----------------------------------------------------------------------

Query:  ----------------DHVKDQTYFLSHLSQNQLKRLLFPLGCIPK
                        D VKDQTYFLSHLSQ QLKRLLFPLGC+ K
Subjt:  ----------------DHVKDQTYFLSHLSQNQLKRLLFPLGCIPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCATGTTTTATTCGAGCCAATGTGTAGAAAATGGCAAGGCCTCTTTTGGGGTTGTTGAAGCCGTTAACCTTATAACTTCTTTGAAATTATTTGGTTTACTCTT
GGTTGTTGGCTATCCGGAAGACTTCGAGAAATTTTGGTCAAAATGTTCATGGGACGATGATTTGAAGTATGCCAAAGCTGTTTGTGATCATGTCAAGGATCAAACATATT
TTCTATCACATCTCTCACAGAATCAACTTAAAAGGCTTTTATTCCCTCTTGGTTGTATTCCAAAGTTGAGGTATCTCTTATGTTTCAGACTTCAGGGTGTATTCCGAGAA
GTTCAAGTTCAACTGTTGATTGTGACTTTAGCAATATTTTTCTTCTCTCAACTTTATATTCCTTCAACAATCGGTTTTAAACCGACATTAAAGGCCAAATTTCTTGTAGT
GTTGATAGATCTATCGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCATGTTTTATTCGAGCCAATGTGTAGAAAATGGCAAGGCCTCTTTTGGGGTTGTTGAAGCCGTTAACCTTATAACTTCTTTGAAATTATTTGGTTTACTCTT
GGTTGTTGGCTATCCGGAAGACTTCGAGAAATTTTGGTCAAAATGTTCATGGGACGATGATTTGAAGTATGCCAAAGCTGTTTGTGATCATGTCAAGGATCAAACATATT
TTCTATCACATCTCTCACAGAATCAACTTAAAAGGCTTTTATTCCCTCTTGGTTGTATTCCAAAGTTGAGGTATCTCTTATGTTTCAGACTTCAGGGTGTATTCCGAGAA
GTTCAAGTTCAACTGTTGATTGTGACTTTAGCAATATTTTTCTTCTCTCAACTTTATATTCCTTCAACAATCGGTTTTAAACCGACATTAAAGGCCAAATTTCTTGTAGT
GTTGATAGATCTATCGGTGTGA
Protein sequenceShow/hide protein sequence
MSSMFYSSQCVENGKASFGVVEAVNLITSLKLFGLLLVVGYPEDFEKFWSKCSWDDDLKYAKAVCDHVKDQTYFLSHLSQNQLKRLLFPLGCIPKLRYLLCFRLQGVFRE
VQVQLLIVTLAIFFFSQLYIPSTIGFKPTLKAKFLVVLIDLSV