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MELO3C035709 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035709
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionSWIM-type domain-containing protein
Genome locationchr12:20180543..20183321
RNA-Seq ExpressionMELO3C035709
SyntenyMELO3C035709
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.4e-3843.05Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA
        M+KL ++VFHSGQWD+  SY++YKT  VLVD ++ SF++FV+LI  E+  +   S I+LS+LL  G   +Q V++I E+KDV WFL+L+K Q T++PLVA
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA

Query:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC
        H++  V D+ +  SS          S +    + D+  I  ++ +++                   SK     A+KNNFEFKT+RSNSKSIE +C++D C
Subjt:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC

Query:  LWFVRASRYKRSELWMIRKYFTD
         W+VRASRYK  ELW +RKY  +
Subjt:  LWFVRASRYKRSELWMIRKYFTD

KAA0059897.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.4e-3843.05Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA
        M+KL ++VFHSGQWD+  SY++YKT  VLVD ++ SF++FV+LI  E+  +   S I+LS+LL  G   +Q V++I E+KDV WFL+L+K Q T++PLVA
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA

Query:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC
        H++  V D+ +  SS          S +    + D+  I  ++ +++                   SK     A+KNNFEFKT+RSNSKSIE +C++D C
Subjt:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC

Query:  LWFVRASRYKRSELWMIRKYFTD
         W+VRASRYK  ELW +RKY  +
Subjt:  LWFVRASRYKRSELWMIRKYFTD

KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]5.6e-8581.04Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV
        MVKL VIVFHSGQWDEQQSYVDYKTNCVLVD VISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDV WFLTL+KDQSTQYPLVAHSV
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV

Query:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS
        + VLD S+GSS SSSIVEVDLGDEL IFR+VDITNSK                        AVK+NFEFKTLRSNS+SIELRCNEDGCLWFVRASRYKRS
Subjt:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS

Query:  ELWMIRKYFTD
        E WMIRKY +D
Subjt:  ELWMIRKYFTD

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]5.6e-8581.04Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV
        MVKL VIVFHSGQWDEQQSYVDYKTNCVLVD VISSFDSFVNLIRTEIQVESCIELSVLLPIGSN VQHVLKIVENKDV WFLTL+KDQSTQYPLVAHSV
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV

Query:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS
        + VLD S+GSS SSSIVEVDLGDEL IFR+VDITNSK                        AVK+NFEFKTLRSNS+SIELRCNEDGCLWFVRASRYKRS
Subjt:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS

Query:  ELWMIRKYFTD
        ELWMIRKY +D
Subjt:  ELWMIRKYFTD

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.4e-3843.05Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA
        M+KL ++VFHSGQWD+  SY++YKT  VLVD ++ SF++FV+LI  E+  +   S I+LS+LL  G   +Q V++I E+KDV WFL+L+K Q T++PLVA
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA

Query:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC
        H++  V D+ +  SS          S +    + D+  I  ++ +++                   SK     A+KNNFEFKT+RSNSKSIE +C++D C
Subjt:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC

Query:  LWFVRASRYKRSELWMIRKYFTD
         W+VRASRYK  ELW +RKY  +
Subjt:  LWFVRASRYKRSELWMIRKYFTD

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like6.6e-3943.05Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA
        M+KL ++VFHSGQWD+  SY++YKT  VLVD ++ SF++FV+LI  E+  +   S I+LS+LL  G   +Q V++I E+KDV WFL+L+K Q T++PLVA
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA

Query:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC
        H++  V D+ +  SS          S +    + D+  I  ++ +++                   SK     A+KNNFEFKT+RSNSKSIE +C++D C
Subjt:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC

Query:  LWFVRASRYKRSELWMIRKYFTD
         W+VRASRYK  ELW +RKY  +
Subjt:  LWFVRASRYKRSELWMIRKYFTD

A0A5A7V6N4 SWIM-type domain-containing protein2.7e-8581.04Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV
        MVKL VIVFHSGQWDEQQSYVDYKTNCVLVD VISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDV WFLTL+KDQSTQYPLVAHSV
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV

Query:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS
        + VLD S+GSS SSSIVEVDLGDEL IFR+VDITNSK                        AVK+NFEFKTLRSNS+SIELRCNEDGCLWFVRASRYKRS
Subjt:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS

Query:  ELWMIRKYFTD
        E WMIRKY +D
Subjt:  ELWMIRKYFTD

A0A5D3BD68 SWIM-type domain-containing protein2.7e-8581.04Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV
        MVKL VIVFHSGQWDEQQSYVDYKTNCVLVD VISSFDSFVNLIRTEIQVESCIELSVLLPIGSN VQHVLKIVENKDV WFLTL+KDQSTQYPLVAHSV
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSV

Query:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS
        + VLD S+GSS SSSIVEVDLGDEL IFR+VDITNSK                        AVK+NFEFKTLRSNS+SIELRCNEDGCLWFVRASRYKRS
Subjt:  DIVLDVSIGSS-SSSIVEVDLGDELAIFRNVDITNSK------------------------AVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRS

Query:  ELWMIRKYFTD
        ELWMIRKY +D
Subjt:  ELWMIRKYFTD

A0A5D3C8T8 SWIM-type domain-containing protein6.6e-3943.05Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA
        M+KL ++VFHSGQWD+  SY++YKT  VLVD ++ SF++FV+LI  E+  +   S I+LS+LL  G   +Q V++I E+KDV WFL+L+K Q T++PLVA
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA

Query:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC
        H++  V D+ +  SS          S +    + D+  I  ++ +++                   SK     A+KNNFEFKT+RSNSKSIE +C++D C
Subjt:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC

Query:  LWFVRASRYKRSELWMIRKYFTD
         W+VRASRYK  ELW +RKY  +
Subjt:  LWFVRASRYKRSELWMIRKYFTD

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like6.6e-3943.05Show/hide
Query:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA
        M+KL ++VFHSGQWD+  SY++YKT  VLVD ++ SF++FV+LI  E+  +   S I+LS+LL  G   +Q V++I E+KDV WFL+L+K Q T++PLVA
Subjt:  MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVE---SCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVA

Query:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC
        H++  V D+ +  SS          S +    + D+  I  ++ +++                   SK     A+KNNFEFKT+RSNSKSIE +C++D C
Subjt:  HSVDIVLDVSIGSSS----------SSIVEVDLGDELAIFRNVDITN-------------------SK-----AVKNNFEFKTLRSNSKSIELRCNEDGC

Query:  LWFVRASRYKRSELWMIRKYFTD
         W+VRASRYK  ELW +RKY  +
Subjt:  LWFVRASRYKRSELWMIRKYFTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAGCTTGTAGTAATTGTTTTTCATAGTGGTCAATGGGATGAGCAACAGTCCTATGTGGATTACAAAACAAATTGTGTTTTGGTTGATGGAGTGATATCA
TCATTTGATTCTTTTGTGAATTTAATACGTACTGAAATTCAAGTTGAGTCATGTATTGAACTTTCGGTTTTGTTGCCTATAGGTAGTAATGGTGTTCAACATGTT
CTAAAGATTGTTGAAAATAAAGATGTGGCTTGGTTCTTGACATTGATTAAGGATCAATCTACCCAATATCCTTTAGTTGCTCATTCTGTAGATATAGTTTTGGAT
GTTTCAATTGGTTCTTCTTCCTCTTCCATAGTTGAGGTTGATTTGGGAGATGAATTAGCAATTTTTAGAAATGTTGATATTACTAATAGTAAGGCTGTCAAGAAT
AATTTTGAATTTAAGACATTGAGATCTAATTCAAAATCAATTGAGTTGAGATGTAATGAAGATGGTTGTCTTTGGTTTGTTAGAGCATCGCGTTATAAAAGAAGT
GAATTATGGATGATTCGAAAATATTTTACCGATATACCTATTATGAAGTATACTTATTGTATGATGTTCATTTACTACATATGA
mRNA sequenceShow/hide mRNA sequence
AGTAAGAGATCTTGAATTAGAGGAATCGGCACAAAAGGAAGACCCAATACTACAAGAAGCAGCTACCCCTAGTCGCACAGGTGCAACTATCCGGTTGAGCACAAC
ATCCTTATGCACCCATTTCATAGGTGTAGCTGGTGTATTCGGGGGCTCCCTATTTAGTCCTATGCATGGTTCCTTGGTTACTTCTAGTTTAATCAGGGAAAGCAC
AAAAAATGAATATGCTAATTCAGGTTACAGATTCGGTCAAGAGGAAGAAACTGAGAATATCGTAGTTCATTGTAGTTATGGTTAAGCTTGTAGTAATTGTTTTTC
ATAGTGGTCAATGGGATGAGCAACAGTCCTATGTGGATTACAAAACAAATTGTGTTTTGGTTGATGGAGTGATATCATCATTTGATTCTTTTGTGAATTTAATAC
GTACTGAAATTCAAGTTGAGTCATGTATTGAACTTTCGGTTTTGTTGCCTATAGGTAGTAATGGTGTTCAACATGTTCTAAAGATTGTTGAAAATAAAGATGTGG
CTTGGTTCTTGACATTGATTAAGGATCAATCTACCCAATATCCTTTAGTTGCTCATTCTGTAGATATAGTTTTGGATGTTTCAATTGGTTCTTCTTCCTCTTCCA
TAGTTGAGGTTGATTTGGGAGATGAATTAGCAATTTTTAGAAATGTTGATATTACTAATAGTAAGGCTGTCAAGAATAATTTTGAATTTAAGACATTGAGATCTA
ATTCAAAATCAATTGAGTTGAGATGTAATGAAGATGGTTGTCTTTGGTTTGTTAGAGCATCGCGTTATAAAAGAAGTGAATTATGGATGATTCGAAAATATTTTA
CCGATATACCTATTATGAAGTATACTTATTGTATGATGTTCATTTACTACATATGA
Protein sequenceShow/hide protein sequence
MVKLVVIVFHSGQWDEQQSYVDYKTNCVLVDGVISSFDSFVNLIRTEIQVESCIELSVLLPIGSNGVQHVLKIVENKDVAWFLTLIKDQSTQYPLVAHSVDIVLD
VSIGSSSSSIVEVDLGDELAIFRNVDITNSKAVKNNFEFKTLRSNSKSIELRCNEDGCLWFVRASRYKRSELWMIRKYFTDIPIMKYTYCMMFIYYI