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MELO3C035765 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035765
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRHOMBOID-like protein 12, mitochondrial
Genome locationchr12:25314509..25316463
RNA-Seq ExpressionMELO3C035765
SyntenyMELO3C035765
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019987.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-0840.43Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--
        MNK F  SR LASRLSNS+                             T  + DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--

Query:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL
             GS       +LK  FDH+W GR    FQ L+T  V+
Subjt:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL

KGN64066.1 hypothetical protein Csa_013348 [Cucumis sativus]5.7e-3284.44Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKLAFDHQWGGRMTTK
        MN+LFSLSR LASRLSNSFPTPTLDIDHSRS    PSFAEKIYGF SVPAAGKRFIFN SNTLFRK L+QI SELKLAFDHQWGG + TK
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKLAFDHQWGGRMTTK

XP_004137444.1 RHOMBOID-like protein 12, mitochondrial [Cucumis sativus]7.5e-0840.31Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG
        MNKLF  SR L SRLSNS+   +LD                             DHSRS     SFA+KI+GFFSVP  GKRFI N SNT F+  +K + 
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG

Query:  S---------------ELKLAFDHQWGGR
                        +LK  F HQWGGR
Subjt:  S---------------ELKLAFDHQWGGR

XP_022923619.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita moschata]2.6e-0840.43Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--
        MNK+F  SR LASRLSNS+                             T  + DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--

Query:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL
             GS       +LK  FDH+W GR    FQ L+T  V+
Subjt:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL

XP_023519071.1 RHOMBOID-like protein 12, mitochondrial [Cucurbita pepo subsp. pepo]1.5e-0841.84Show/hide
Query:  MNKLFSLSRNLASRLSN------------SFPTPTLD---------------IDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--
        MNK F  SR LASRLSN            SF T  L                 DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSN------------SFPTPTLD---------------IDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--

Query:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL
             GS       +LK  FDH+W GR    FQ L+T  V+
Subjt:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL

TrEMBL top hitse value%identityAlignment
A0A0A0LTI7 Rhomboid domain-containing protein3.6e-0840.31Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG
        MNKLF  SR L SRLSNS+   +LD                             DHSRS     SFA+KI+GFFSVP  GKRFI N SNT F+  +K + 
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDI----------------------------DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG

Query:  S---------------ELKLAFDHQWGGR
                        +LK  F HQWGGR
Subjt:  S---------------ELKLAFDHQWGGR

A0A0A0LVM8 Uncharacterized protein2.7e-3284.44Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKLAFDHQWGGRMTTK
        MN+LFSLSR LASRLSNSFPTPTLDIDHSRS    PSFAEKIYGF SVPAAGKRFIFN SNTLFRK L+QI SELKLAFDHQWGG + TK
Subjt:  MNKLFSLSRNLASRLSNSFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKLAFDHQWGGRMTTK

A0A5D3BLA0 RHOMBOID-like protein 121.2e-0639.53Show/hide
Query:  MNKLFSLSRNLASRLSN----------------------------SFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG
        MNKLF  SR LASRLSN                            SF T  L  DHSRS     SF +KI+GFFSVP  GKR + N SNT F+  +K + 
Subjt:  MNKLFSLSRNLASRLSN----------------------------SFPTPTLDIDHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIG

Query:  S---------------ELKLAFDHQWGGR
                        +LK  F HQWGGR
Subjt:  S---------------ELKLAFDHQWGGR

A0A6J1E6X7 RHOMBOID-like protein 12, mitochondrial1.2e-0840.43Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--
        MNK+F  SR LASRLSNS+                             T  + DHSRS     SF EKI+GFFS P  GKRFI N SNTLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--

Query:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL
             GS       +LK  FDH+W GR    FQ L+T  V+
Subjt:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL

A0A6J1KPT4 RHOMBOID-like protein 12, mitochondrial1.2e-0639.01Show/hide
Query:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--
        MNK F  SR LASRLSNS+                             T  + DHSRS     S  EKI+GFFS P  GKRFI N S+TLF+  +K +  
Subjt:  MNKLFSLSRNLASRLSNSFPTP--------------------------TLDI-DHSRS----PSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQI--

Query:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL
             GS       +LK  FDH+W GR    FQ L+T  V+
Subjt:  -----GS-------ELKLAFDHQWGGRMTTKFQDLSTCGVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGCTCTTTTCTCTTTCTCGCAACCTTGCATCAAGGCTTTCGAATTCCTTTCCTACTCCAACTCTCGACATTGATCACTCCCGTTCACCAAGTTTTGCCGAGAA
AATTTATGGGTTTTTCTCAGTTCCGGCGGCCGGAAAGCGATTCATCTTCAATATTTCAAATACCCTTTTCAGGAAGGGTCTAAAACAAATTGGGTCTGAGTTGAAACTAG
CTTTTGATCATCAATGGGGAGGCAGAATGACAACCAAATTTCAAGATCTATCCACTTGTGGGGTATTGCATTTCCAACCTCCATCCGTGCCCTTCTCTGAATATCGGAAG
AACTTTCGTACTCGAAACTGTATGCAAAATGTGACAAAAGCAAATGTAAATAAGGGACCATTATTAGAACCTGTTTGGAAACACAGAGAAGCTCATTCACTACTGGGATT
AAATTTTAGACTGGATAAGCCGAGAGTGGACAACAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGCTCTTTTCTCTTTCTCGCAACCTTGCATCAAGGCTTTCGAATTCCTTTCCTACTCCAACTCTCGACATTGATCACTCCCGTTCACCAAGTTTTGCCGAGAA
AATTTATGGGTTTTTCTCAGTTCCGGCGGCCGGAAAGCGATTCATCTTCAATATTTCAAATACCCTTTTCAGGAAGGGTCTAAAACAAATTGGGTCTGAGTTGAAACTAG
CTTTTGATCATCAATGGGGAGGCAGAATGACAACCAAATTTCAAGATCTATCCACTTGTGGGGTATTGCATTTCCAACCTCCATCCGTGCCCTTCTCTGAATATCGGAAG
AACTTTCGTACTCGAAACTGTATGCAAAATGTGACAAAAGCAAATGTAAATAAGGGACCATTATTAGAACCTGTTTGGAAACACAGAGAAGCTCATTCACTACTGGGATT
AAATTTTAGACTGGATAAGCCGAGAGTGGACAACAGTTGA
Protein sequenceShow/hide protein sequence
MNKLFSLSRNLASRLSNSFPTPTLDIDHSRSPSFAEKIYGFFSVPAAGKRFIFNISNTLFRKGLKQIGSELKLAFDHQWGGRMTTKFQDLSTCGVLHFQPPSVPFSEYRK
NFRTRNCMQNVTKANVNKGPLLEPVWKHREAHSLLGLNFRLDKPRVDNS