; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000014 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000014
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionR3H domain containing protein
Genome locationscaffold946_1:33681..37104
RNA-Seq ExpressionMS000014
SyntenyMS000014
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152036.1 uncharacterized protein LOC111019846 [Momordica charantia]1.0e-18799.7Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGS KQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
        CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

XP_022934814.1 uncharacterized protein LOC111441873 [Cucurbita moschata]2.4e-16588.43Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        S S+E  PQG K+KESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKT+E
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSVRLSEIPAKQ DNEK+E VK VIRPRPNKMSE +ANDG  KQNSVRSVEERKEEYDRARARIFSSPSSP+LDDT SQ+PS+GKYACSNRDETE  
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTL G DLEKFNGR+GMTSRVAIFKDREKDRSDPDYDRNY+RY RNLPTNQNL+LAPF MQK+QPPFVQ D GYSLMGHIPGTQ S+SYGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
          +G+N+TSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

XP_022944145.1 uncharacterized protein LOC111448686 [Cucurbita moschata]4.1e-16588.96Show/hide
Query:  SYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENR
        S++ APQG    +SMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQ FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSG+DGFGNRILVRKT E+R
Subjt:  SYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENR

Query:  LPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRT
        LPSV LSEIPAKQLDNEKHE VKIVIRPRPNKMSEI+ANDG  KQ+SVRSVEERKEEYDRARARIFSSPSSP+LDDT SQAPS+GKY CSNRDETE  RT
Subjt:  LPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRT

Query:  LVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCT
        L G DLEKFNGR+ MTSRVAIFKDREKDRSDPDYDRNY+RY RNLP NQN +LAPF+M KIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSP VSPFCT
Subjt:  LVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCT

Query:  VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
        VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

XP_022983817.1 uncharacterized protein LOC111482320 [Cucurbita maxima]1.1e-16588.72Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        S S+E  PQG KEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKT+E
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSVRLSEIPAKQLDNEK+E VK VIRPRPNKMSE +ANDG  KQNSVRSVEERKEEYDRARARIFSSPSSP+LDDT SQ+PS+GKYACSNRDETE  
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTL G D EKFNGR+GMTSRVAIFKDREKDRSDPDYDRNY+RY RNLPTNQNL+LAPF MQKIQPPFVQ D GYSLMGHIPGTQ S++YGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
          +G+N+TSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

XP_038903441.1 uncharacterized protein LOC120090027 [Benincasa hispida]1.2e-16789.02Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        S S++  PQG K+KESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKT+E
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSV LSEIPAKQLDNEKHE VKIVIRPRPNKMS I+AN+G  KQ+SVRSVEERKEEYD+ARARIFSSPSSP++D+T SQ PS+GKYACSNRDETE  
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTL G DLEKFNGR+GMTSRVAIFKDREKDRSDPDYDRNY+RY RNLPTNQNL+LAPFIMQKIQPPFVQYDSGYSLMGH+PGTQASV+YGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
        C +GLNQ SRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LFE9 Uncharacterized protein4.4e-16587.54Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        S S++  PQG  +KESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRI+VRK  E
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSVRLSEIPAKQLDNEKHE VKIVIRPRPNKMS I+AN+G  KQ+SVRSVEERKEEYDRARARIFSSPSSP++DDT SQ PS+GKYACSNRDETE  
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTL G +LEKFNGR+GMTSRVAIFKDREKDRSDPDYDRNY+RY RNLPTNQNL+LAPFIM K+QPPFVQYDSGYSL+GH+PGTQASV+YGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
        C +GLNQ SRDASYEQWQSAAMMYAHSYNQ RHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

A0A6J1DGF4 uncharacterized protein LOC1110198464.9e-18899.7Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGS KQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
        CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

A0A6J1F3M8 uncharacterized protein LOC1114418731.2e-16588.43Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        S S+E  PQG K+KESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKT+E
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSVRLSEIPAKQ DNEK+E VK VIRPRPNKMSE +ANDG  KQNSVRSVEERKEEYDRARARIFSSPSSP+LDDT SQ+PS+GKYACSNRDETE  
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTL G DLEKFNGR+GMTSRVAIFKDREKDRSDPDYDRNY+RY RNLPTNQNL+LAPF MQK+QPPFVQ D GYSLMGHIPGTQ S+SYGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
          +G+N+TSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

A0A6J1FYH7 uncharacterized protein LOC1114486862.0e-16588.96Show/hide
Query:  SYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENR
        S++ APQG    +SMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQ FEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSG+DGFGNRILVRKT E+R
Subjt:  SYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENR

Query:  LPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRT
        LPSV LSEIPAKQLDNEKHE VKIVIRPRPNKMSEI+ANDG  KQ+SVRSVEERKEEYDRARARIFSSPSSP+LDDT SQAPS+GKY CSNRDETE  RT
Subjt:  LPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRT

Query:  LVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCT
        L G DLEKFNGR+ MTSRVAIFKDREKDRSDPDYDRNY+RY RNLP NQN +LAPF+M KIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSP VSPFCT
Subjt:  LVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCT

Query:  VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
        VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  VGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

A0A6J1J0D7 uncharacterized protein LOC1114823205.2e-16688.72Show/hide
Query:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE
        S S+E  PQG KEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNP+QQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKT+E
Subjt:  SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLE

Query:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI
        NRLPSVRLSEIPAKQLDNEK+E VK VIRPRPNKMSE +ANDG  KQNSVRSVEERKEEYDRARARIFSSPSSP+LDDT SQ+PS+GKYACSNRDETE  
Subjt:  NRLPSVRLSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETI

Query:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF
        RTL G D EKFNGR+GMTSRVAIFKDREKDRSDPDYDRNY+RY RNLPTNQNL+LAPF MQKIQPPFVQ D GYSLMGHIPGTQ S++YGPHPSPVVSPF
Subjt:  RTLVGSDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPF

Query:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
          +G+N+TSRDASYEQWQSAAMMYAHSYNQLRHSAFQ
Subjt:  CTVGLNQTSRDASYEQWQSAAMMYAHSYNQLRHSAFQ

SwissProt top hitse value%identityAlignment
A0JNC2 R3H domain-containing protein 24.2e-1131.22Show/hide
Query:  FLVEAL-QNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLD
        FLV  L +NPR R+ +L++E +I  F+++   Q   F+ FP  TSY R+  HRVA ++G+     D  +D  G  +++ KT   R+P  R SE   K   
Subjt:  FLVEAL-QNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLD

Query:  NEKHEHVKIVIR-----PRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPD--LDDTPSQAPSDGKYACSNRDETET
        N + +   I+ R      R +    +   DG R     +S+EER+EEY R R RIF+  +  +  L+D         + + S +  T++
Subjt:  NEKHEHVKIVIR-----PRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPD--LDDTPSQAPSDGKYACSNRDETET

Q15032 R3H domain-containing protein 14.2e-1135.26Show/hide
Query:  FLVEALQ-NPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLDNE
        FLV  L+ NPR R+ +L++E +I  F+ N E    +F    TSY R+  HRVA ++GL     D  +D  G  ++V KT   R+P  + +E      D++
Subjt:  FLVEALQ-NPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLDNE

Query:  KHEHVKIVIRPRPNKMSEIAAND---GSRKQNSVRSVEERKEEYDRARARIFSSPS
          +  K  I  R N   +   N      +     +S+EER+EEY RAR RIFS  S
Subjt:  KHEHVKIVIRPRPNKMSEIAAND---GSRKQNSVRSVEERKEEYDRARARIFSSPS

Q80TM6 R3H domain-containing protein 23.8e-1235.03Show/hide
Query:  FLVEAL-QNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLD
        FLV  L +NPR R+ +L++E +I  F+++   Q   F+ FP  TSY R+  HRVA ++G+     D  +D  G  +++ KT   R+P  R SE   K   
Subjt:  FLVEAL-QNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFP--TSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLD

Query:  NEKHEHVKIVIR-----PRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFS
        N + +   I+ R      R +    +   DG R     +S+EER+EEY R R RIF+
Subjt:  NEKHEHVKIVIR-----PRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFS

Q9DCB4 cAMP-regulated phosphoprotein 211.0e-0932.7Show/hide
Query:  FLVEALQ-NPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLDNE
        FL+  L+ N R R+ +L+ME ++  F+ +      +F    +SY R+  HRVA ++GL     D  +D  G  +++ KT   R+P  R  E      D +
Subjt:  FLVEALQ-NPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLDNE

Query:  KHEHVKIVIRPRPNKMSEIAANDGSRKQNSVR------SVEERKEEYDRARARIFSSPS
          E  K  I  R N  S I   D   + +  R      S+EER+EEY R R RIF+  S
Subjt:  KHEHVKIVIRPRPNKMSEIAANDGSRKQNSVR------SVEERKEEYDRARARIFSSPS

Q9UBL0 cAMP-regulated phosphoprotein 211.0e-0933.33Show/hide
Query:  FLVEALQ-NPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLDNE
        FL+  L+ N R R+ +L+ME +I  F+ +      +F    +SY R+  HRVA ++GL     D  +D  G  +++ KT   R+P  R  E     L +E
Subjt:  FLVEALQ-NPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIPAKQLDNE

Query:  K-HEHVKIVIRPRPNKMSEIAANDGS-----RKQNSVRSVEERKEEYDRARARIFSSPS
        K  E  K  I  R N   +   N  +     R     +S+EER+EEY R R RIF+  S
Subjt:  K-HEHVKIVIRPRPNKMSEIAANDGS-----RKQNSVRSVEERKEEYDRARARIFSSPS

Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein1.3e-7951.82Show/hide
Query:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSE
        + +K   VDPFLVEALQNPRHRLTILRMELD+Q+FL +P+QQ FEFQHFPTSYLR AAHRVA HYGL T V+D G DG  +RI+V K+ ++R P+ RLSE
Subjt:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSE

Query:  IPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRT-LVGSDLE
        IP KQ +  K EH+K+VI+PRP K S +  ++   K   ++SVEERKE+YDRARARIF+   + D +D+ S+         S+RDE + ++   + +D  
Subjt:  IPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRT-LVGSDLE

Query:  KFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCTVGLNQTS
          + +    SR+AI +DREKDR DPDYDR+  RY  NLP +QNL +A F +Q +  P   YD G+   G+ P    S++ G H   V+SP  T GLNQ S
Subjt:  KFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCTVGLNQTS

Query:  RDAS-YEQW-QSAAMMYAHSYNQLRHSAFQ
        RDA+ Y QW  +AA+MY HSY+  R+S FQ
Subjt:  RDAS-YEQW-QSAAMMYAHSYNQLRHSAFQ

AT3G10770.1 Single-stranded nucleic acid binding R3H protein1.4e-7351.8Show/hide
Query:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGI---DGFGNRILVRKTLENRLPSVR
        + EKE+MVDPFLVEALQNPRHRLTILRMELDIQKF  NPEQ  FEF  FPTSYLRLAAHRVAQHYGL TM  D+G    DG  NRILV KT E+R P V 
Subjt:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGI---DGFGNRILVRKTLENRLPSVR

Query:  LSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPS--DGKYACSNRDETETIRTLVG
        LSEIP KQ +N + E  KI I+PRP + S    +    +QN +RSVEERKEEYD+ARARIF+SPSS D +D+ S  P   + +  C NR+ETE    +  
Subjt:  LSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPS--DGKYACSNRDETETIRTLVG

Query:  SDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYE--------RYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIP-GTQASVSYGPHPSPV
        S ++      G TSRVAI +DREKDR DPDYDR+Y+        RY R +P+ Q+ +  P          + +  G+    H+P G QA+++YG   +P 
Subjt:  SDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYE--------RYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIP-GTQASVSYGPHPSPV

Query:  VSPFCTVGLNQTSRDASYEQW-QSAAMMYAHSYN
        +SPF       T   ASY  W  S  M YA   N
Subjt:  VSPFCTVGLNQTSRDASYEQW-QSAAMMYAHSYN

AT3G10770.2 Single-stranded nucleic acid binding R3H protein8.5e-7653.07Show/hide
Query:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGI---DGFGNRILVRKTLENRLPSVR
        + EKE+MVDPFLVEALQNPRHRLTILRMELDIQKF  NPEQ  FEF  FPTSYLRLAAHRVAQHYGL TM  D+G    DG  NRILV KT E+R P V 
Subjt:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGI---DGFGNRILVRKTLENRLPSVR

Query:  LSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPS--DGKYACSNRDETETIRTLVG
        LSEIP KQ +N + E  KI I+PRP + S    +    +QN +RSVEERKEEYD+ARARIF+SPSS D +D+ S  P   + +  C NR+ETE    +  
Subjt:  LSEIPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPS--DGKYACSNRDETETIRTLVG

Query:  SDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIP-GTQASVSYGPHPSPVVSPFCTVG
        S ++      G TSRVAI +DREKDR DPDYDR+Y+RY R +P+ Q+ +  P          + +  G+    H+P G QA+++YG   +P +SPF    
Subjt:  SDLEKFNGREGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIP-GTQASVSYGPHPSPVVSPFCTVG

Query:  LNQTSRDASYEQW-QSAAMMYAHSYN
           T   ASY  W  S  M YA   N
Subjt:  LNQTSRDASYEQW-QSAAMMYAHSYN

AT3G56680.1 Single-stranded nucleic acid binding R3H protein1.8e-8654.97Show/hide
Query:  VDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIP-AKQL
        VDPFLVEAL N RHRLTILRMELD+Q+ L NPEQQ FEFQHFPTSYLRLAAHRVA HYGL T VQ+SG DG  NRILV KT E++ P+VRLSEIP AKQ 
Subjt:  VDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSEIP-AKQL

Query:  DNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRTLVGSDLEKFNGRE-
        +N K E  K+ I+ RP+K S   A D  + +  +RSVEERKEEYD+AR RIFS  +    DD+ S+     + A  +RD+ +  +       +  + RE 
Subjt:  DNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRTLVGSDLEKFNGRE-

Query:  GMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCTVGLNQTSRDASYE
        G TSRVAIF+DREKDR DPDYDR ++RY R+LP NQN NL PF +Q+I  P+  Y+ G++    IP   A + +GPHPS ++SP+       T+ DA Y 
Subjt:  GMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCTVGLNQTSRDASYE

Query:  QWQSAAMMYAHSYNQLRHSAFQ
         W +AAMMYAH Y Q R+ + Q
Subjt:  QWQSAAMMYAHSYNQLRHSAFQ

AT5G05100.1 Single-stranded nucleic acid binding R3H protein4.4e-7251.8Show/hide
Query:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDSGIDGFGNRILVRKTLENRLPSVRLS
        + +KE+MVDPFLVEALQNPRHRLTILRMELDIQKF  +PEQQ +EFQ  PTSYLRL AHRVAQHYGL  T ++  G+DG GNRIL  KT+E+R P V LS
Subjt:  LKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDSGIDGFGNRILVRKTLENRLPSVRLS

Query:  EIPAKQLD-NEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPS------DGKY--ACSNRDETETI
        EIP KQ + + + E  KI I+PRPN+ +  + +    ++N +RSVEERKEEYD+ARARIF+SPSS D +D+ ++AP       D K+  AC +R+ETE +
Subjt:  EIPAKQLD-NEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPS------DGKY--ACSNRDETETI

Query:  RTLVGS--DLEKFNG---REGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSP
             +  D+E+ NG     G TSRVAI +DREKDR DPDYDRN  RY R  P  QN N  P        P   +D   ++   +P TQAS++YG HP  
Subjt:  RTLVGS--DLEKFNG---REGMTSRVAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSP

Query:  VVSPFCTVGLNQTSRDASYEQWQSAAMMYAHSYN
                 LN      SY +W SA M YA + N
Subjt:  VVSPFCTVGLNQTSRDASYEQWQSAAMMYAHSYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAGATTCCTATGAGGCCGCCCCACAAGGGTTGAAGGAGAAAGAGTCAATGGTTGACCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGACATCGTCTCACCATTTTACG
AATGGAACTTGATATCCAGAAGTTTTTGCATAACCCGGAACAGCAGCTTTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCACCGTGTTGCTCAAC
ATTATGGCCTTCAAACCATGGTCCAGGACTCTGGCATAGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGTTGGAAAACAGACTCCCTTCTGTGCGTCTATCTGAA
ATACCTGCGAAGCAATTGGACAATGAGAAGCATGAGCATGTCAAAATTGTCATCAGACCTAGACCTAACAAAATGTCTGAAATTGCTGCCAATGATGGAAGTCGAAAACA
AAATTCTGTCAGAAGTGTGGAAGAGAGAAAGGAGGAATATGATAGGGCACGAGCTCGGATTTTCAGCTCCCCAAGTAGTCCTGATTTAGATGATACACCGTCTCAAGCCC
CATCTGACGGAAAGTATGCATGTTCAAACAGGGATGAGACTGAAACCATTAGAACTTTGGTGGGTAGTGATTTGGAAAAATTTAATGGCAGGGAAGGAATGACTTCTCGG
GTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCAGATTATGATCGCAATTATGAGAGGTATAATAGGAACCTTCCAACCAATCAAAACTTAAACTTAGCCCC
CTTTATTATGCAAAAAATTCAACCTCCATTTGTACAATATGATTCGGGTTATTCTCTCATGGGTCATATACCGGGAACTCAAGCTTCAGTTAGCTATGGGCCTCATCCTA
GTCCTGTTGTAAGCCCTTTCTGCACAGTGGGTTTAAACCAGACATCTAGAGATGCATCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAATCAG
CTCAGGCATTCTGCTTTCCAG
mRNA sequenceShow/hide mRNA sequence
TCAGATTCCTATGAGGCCGCCCCACAAGGGTTGAAGGAGAAAGAGTCAATGGTTGACCCCTTCTTGGTTGAGGCTCTCCAGAATCCTCGACATCGTCTCACCATTTTACG
AATGGAACTTGATATCCAGAAGTTTTTGCATAACCCGGAACAGCAGCTTTTCGAGTTCCAGCATTTTCCTACATCATACCTTCGACTTGCTGCTCACCGTGTTGCTCAAC
ATTATGGCCTTCAAACCATGGTCCAGGACTCTGGCATAGATGGTTTTGGAAATAGGATCTTGGTTCGTAAAACGTTGGAAAACAGACTCCCTTCTGTGCGTCTATCTGAA
ATACCTGCGAAGCAATTGGACAATGAGAAGCATGAGCATGTCAAAATTGTCATCAGACCTAGACCTAACAAAATGTCTGAAATTGCTGCCAATGATGGAAGTCGAAAACA
AAATTCTGTCAGAAGTGTGGAAGAGAGAAAGGAGGAATATGATAGGGCACGAGCTCGGATTTTCAGCTCCCCAAGTAGTCCTGATTTAGATGATACACCGTCTCAAGCCC
CATCTGACGGAAAGTATGCATGTTCAAACAGGGATGAGACTGAAACCATTAGAACTTTGGTGGGTAGTGATTTGGAAAAATTTAATGGCAGGGAAGGAATGACTTCTCGG
GTTGCCATTTTCAAAGATAGGGAAAAGGATCGTAGTGACCCAGATTATGATCGCAATTATGAGAGGTATAATAGGAACCTTCCAACCAATCAAAACTTAAACTTAGCCCC
CTTTATTATGCAAAAAATTCAACCTCCATTTGTACAATATGATTCGGGTTATTCTCTCATGGGTCATATACCGGGAACTCAAGCTTCAGTTAGCTATGGGCCTCATCCTA
GTCCTGTTGTAAGCCCTTTCTGCACAGTGGGTTTAAACCAGACATCTAGAGATGCATCTTATGAGCAGTGGCAGAGTGCTGCAATGATGTATGCCCATTCCTACAATCAG
CTCAGGCATTCTGCTTTCCAG
Protein sequenceShow/hide protein sequence
SDSYEAAPQGLKEKESMVDPFLVEALQNPRHRLTILRMELDIQKFLHNPEQQLFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDSGIDGFGNRILVRKTLENRLPSVRLSE
IPAKQLDNEKHEHVKIVIRPRPNKMSEIAANDGSRKQNSVRSVEERKEEYDRARARIFSSPSSPDLDDTPSQAPSDGKYACSNRDETETIRTLVGSDLEKFNGREGMTSR
VAIFKDREKDRSDPDYDRNYERYNRNLPTNQNLNLAPFIMQKIQPPFVQYDSGYSLMGHIPGTQASVSYGPHPSPVVSPFCTVGLNQTSRDASYEQWQSAAMMYAHSYNQ
LRHSAFQ