CuGenDBv2

Gene ID	MS000017
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cytochrome c oxidase subunit 3
Genome location	scaffold946_1:80487..80738
RNA-Seq Expression	MS000017
Synteny	MS000017
Gene Ontology terms	GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR033945 - Cytochrome c oxidase subunit III domain IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHX81461.1 cytochrome c oxidase subunit 3 [Licania sprucei]

6.2e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

QXE45619.1 cytochrome c oxidase subunit 3 [Pachyrhizus erosus]

6.2e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

XP_022975233.1 uncharacterized protein LOC111474342 [Cucurbita maxima]

6.2e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

XP_023520730.1 uncharacterized protein LOC111784179 [Cucurbita pepo subsp. pepo]

6.2e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

YP_004222830.1 cytochrome c oxidase subunit 3 [Vigna radiata]

6.2e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

TrEMBL top hits

e value

%identity

Alignment

A0A023T2P2 Cytochrome c oxidase subunit 3

3.0e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

A0A0R0H600 Cytochrome c oxidase subunit 3

3.0e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

A0A6J1IIM7 Cytochrome c oxidase subunit 3

3.0e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

E9KZN7 Cytochrome c oxidase subunit 3

3.0e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

E9P2B2 Cytochrome c oxidase subunit 3

3.0e-38

95.06

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

SwissProt top hits

e value

%identity

Alignment

P08745 Cytochrome c oxidase subunit 3

1.3e-38

91.36

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAP TISDSIYGSTF+L TGFHGFHVIIGTLF IICGIRQYLGHLTKEHH+GFE AAWYWHFVDVVRLFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

P14852 Cytochrome c oxidase subunit 3

1.7e-38

90.12

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAP TISDSIYGSTFFL TGFHGFHVIIGTLFLI+CGIRQYLGHLTK+HH+GFE AAWYWHFVDVVRLF FVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

P14853 Cytochrome c oxidase subunit 3

6.9e-40

93.83

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVV LFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

P92514 Cytochrome c oxidase subunit 3

6.9e-40

93.83

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVV LFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

Q03227 Cytochrome c oxidase subunit 3

7.7e-39

91.36

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Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLG +TKEHH+GFE AAWYWHFVDVVRLF FVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

4.9e-41

93.83

Show/hide

Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVV LFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

ATMG00730.1 cytochrome c oxidase subunit 3

4.9e-41

93.83

Show/hide

Query:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL
        FQGMEYYQAPFTISDSIYGSTFFL TGFHGFHVIIGTLFLIICGIRQYLGHLTKEHH+GFE AAWYWHFVDVV LFLFVS+
Subjt:  FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSL

Sequences

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CDS sequence

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TTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTACCAACTGGCTTTCATGGTTTTCATGTGATTATAGGTAC
TCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACATTGGCTTTGAAGTAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTC
GGTTATTCCTATTTGTCTCTCTCCAATCTATC

mRNA sequence

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Protein sequence

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FQGMEYYQAPFTISDSIYGSTFFLPTGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHIGFEVAAWYWHFVDVVRLFLFVSLQSI

MS000017 (gene) of Bitter gourd (TR) v1 genome