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MS000019 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000019
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein sym-1
Genome locationscaffold946_1:151078..151164
RNA-Seq ExpressionMS000019
SyntenyMS000019
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017620.1 SYM1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-0589.66Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANV+ALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
XP_022152060.1 protein sym-1 [Momordica charantia]5.4e-0593.1Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANVLALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
XP_022934093.1 protein sym-1-like [Cucurbita moschata]9.1e-0589.66Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANV+ALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
XP_022983841.1 protein sym-1 [Cucurbita maxima]9.1e-0589.66Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANV+ALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
XP_023527325.1 protein sym-1-like [Cucurbita pepo subsp. pepo]9.1e-0589.66Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANV+ALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
TrEMBL top hitse value%identityAlignment
A0A1S3B718 protein SYM17.5e-0586.21Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAAN+LALAWNVILSFKAH+EIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
A0A5D3DPM1 Protein SYM17.5e-0586.21Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAAN+LALAWNVILSFKAH+EIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
A0A6J1DGH9 protein sym-12.6e-0593.1Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANVLALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
A0A6J1F6P4 protein sym-1-like4.4e-0589.66Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANV+ALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
A0A6J1J3I0 protein sym-14.4e-0589.66Show/hide
Query:  KYQVLAANVLALAWNVILSFKAHREIITR
        ++QVLAANV+ALAWNVILSFKAHREIITR
Subjt:  KYQVLAANVLALAWNVILSFKAHREIITR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19750.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein3.6e-0775Show/hide
Query:  YQVLAANVLALAWNVILSFKAHREIITR
        YQVLA+NV+ALAWNVILSFKAH+E++ +
Subjt:  YQVLAANVLALAWNVILSFKAHREIITR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATATCAGGTCCTTGCAGCTAATGTCCTTGCCTTGGCATGGAATGTCATCCTCTCCTTTAAGGCTCACAGGGAGATCATTACAAGA
mRNA sequenceShow/hide mRNA sequence
AAATATCAGGTCCTTGCAGCTAATGTCCTTGCCTTGGCATGGAATGTCATCCTCTCCTTTAAGGCTCACAGGGAGATCATTACAAGA
Protein sequenceShow/hide protein sequence
KYQVLAANVLALAWNVILSFKAHREIITR