; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000031 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000031
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein s2
Genome locationscaffold946_1:264041..265699
RNA-Seq ExpressionMS000031
SyntenyMS000031
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000851 - Ribosomal protein S5
IPR005324 - Ribosomal protein S5, C-terminal
IPR005711 - Ribosomal protein S5, eukaryotic/archaeal
IPR013810 - Ribosomal protein S5, N-terminal
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR018192 - Ribosomal protein S5, N-terminal, conserved site
IPR020568 - Ribosomal protein S5 domain 2-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59555.2 hypothetical protein Csa_001030 [Cucumis sativus]1.1e-14197.4Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

XP_008443195.1 PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo]1.1e-14197.4Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

XP_011652156.1 40S ribosomal protein S2-4 [Cucumis sativus]1.1e-14197.4Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

XP_022152063.1 40S ribosomal protein S2-4-like [Momordica charantia]7.6e-146100Show/hide
Query:  MAERGGFGRGFGGRGRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR
        MAERGGFGRGFGGRGRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR
Subjt:  MAERGGFGRGFGGRGRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR

Query:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF
        FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF
Subjt:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF

Query:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
Subjt:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

XP_038906344.1 40S ribosomal protein S2-4-like [Benincasa hispida]5.1e-14297.77Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

TrEMBL top hitse value%identityAlignment
A0A0A0LFC7 S5 DRBM domain-containing protein5.5e-14297.4Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

A0A1S3B7F9 40S ribosomal protein S2-3-like5.5e-14297.4Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

A0A5D3DPL0 40S ribosomal protein S2-3-like5.5e-14297.4Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

A0A6J1DDV4 40S ribosomal protein S2-4-like3.7e-146100Show/hide
Query:  MAERGGFGRGFGGRGRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR
        MAERGGFGRGFGGRGRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR
Subjt:  MAERGGFGRGFGGRGRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR

Query:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF
        FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF
Subjt:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF

Query:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
Subjt:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

E5GBY7 40S ribosomal protein s25.5e-14297.4Show/hide
Query:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT
        MAERGGFGRGFGGRGR GGDRGRGGRRR GRRDEEEKWVPVTKLGRLVKEG+IQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRT
Subjt:  MAERGGFGRGFGGRGR-GGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRT

Query:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
        RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV
Subjt:  RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDV

Query:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA
        FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLE+P+RV A
Subjt:  FTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA

SwissProt top hitse value%identityAlignment
P25444 40S ribosomal protein S21.7e-10074Show/hide
Query:  RGGFGRGFGGRGRGGDRGRG-GRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFK
        RGGFG G  GRGRG  RGRG GR   G + E+++W+PVTKLGRLVK+ KI+SLE+IYL SLPIKE +I+D  +G SLKDEV+KIMPVQKQTRAGQRTRFK
Subjt:  RGGFGRGFGGRGRGGDRGRG-GRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFK

Query:  AFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTS
        AFV +GD NGHVGLGVKCSKEVATAIRG+IILAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L  AGI+D +TS
Subjt:  AFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTS

Query:  SRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAK
        +RG T TLGNF KATFD + KTY +LTP+ W+ET FTKSP+QE TD L K
Subjt:  SRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAK

P49688 40S ribosomal protein S2-31.8e-12184.01Show/hide
Query:  ERGGFGRGFGGRGRGGD---RGRGGR--RRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ
        ERG FGRGFGGRG  GD   RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGD---RGRGGR--RRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERV
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD LA    KAL   +P+ V
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERV

Q8L8Y0 40S ribosomal protein S2-14.8e-11984.62Show/hide
Query:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGG RG     RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

Q93VB8 40S ribosomal protein S2-24.8e-11984.62Show/hide
Query:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGG RG     RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

Q9SCM3 40S ribosomal protein S2-43.6e-12287.55Show/hide
Query:  ERGGFGRGFGGR--GRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR
        +RG FGRGFGGR  GRGG RGRG  RR GR  EEEKWVPVTKLGRLVKEGKI  +EQIYLHSLP+KE+QI+D LVGPSLKDEVMKIMPVQKQTRAGQRTR
Subjt:  ERGGFGRGFGGR--GRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR

Query:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF
        FKAF+VVGD NGHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVF
Subjt:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF

Query:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK
        TSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+KSP+QEHTD LL  P VK
Subjt:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK

Arabidopsis top hitse value%identityAlignment
AT1G58380.1 Ribosomal protein S5 family protein3.4e-12084.62Show/hide
Query:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGG RG     RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT1G58983.1 Ribosomal protein S5 family protein3.4e-12084.62Show/hide
Query:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGG RG     RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT1G59359.1 Ribosomal protein S5 family protein3.4e-12084.62Show/hide
Query:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ
        +RG FGRGFGG GRGG RG     RG  RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D LVGP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGDRG-----RGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT2G41840.1 Ribosomal protein S5 family protein1.3e-12284.01Show/hide
Query:  ERGGFGRGFGGRGRGGD---RGRGGR--RRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ
        ERG FGRGFGGRG  GD   RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGFGRGFGGRGRGGD---RGRGGR--RRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERV
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD LA    KAL   +P+ V
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERV

AT3G57490.1 Ribosomal protein S5 family protein2.5e-12387.55Show/hide
Query:  ERGGFGRGFGGR--GRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR
        +RG FGRGFGGR  GRGG RGRG  RR GR  EEEKWVPVTKLGRLVKEGKI  +EQIYLHSLP+KE+QI+D LVGPSLKDEVMKIMPVQKQTRAGQRTR
Subjt:  ERGGFGRGFGGR--GRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTR

Query:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF
        FKAF+VVGD NGHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVF
Subjt:  FKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVF

Query:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK
        TSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+KSP+QEHTD LL  P VK
Subjt:  TSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCGCGGCGGATTTGGACGAGGCTTCGGCGGCAGAGGCCGCGGTGGTGACCGCGGCCGCGGAGGTCGCCGCCGGCCCGGACGACGCGACGAAGAGGAGAAGTG
GGTTCCAGTCACCAAGCTTGGGCGGCTCGTAAAAGAGGGCAAAATCCAGTCCTTGGAGCAGATCTACCTCCACTCTCTCCCCATTAAGGAACATCAGATCGTCGACACCC
TCGTTGGCCCCAGCCTCAAGGACGAGGTCATGAAGATTATGCCCGTCCAGAAGCAGACCCGCGCCGGACAGAGAACCCGATTCAAGGCCTTCGTCGTCGTCGGAGATGGT
AATGGCCATGTGGGTTTGGGAGTGAAGTGTAGTAAGGAGGTCGCCACTGCGATTCGTGGATCTATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTACTG
GGGTAACAAGATCGGTAAGCCCCATACAGTGCCGTGTAAGGTCACCGGAAAGTGTGGATCCGTCACCGTCCGGATGGTTCCGGCGCCTCGAGGTGCGGGGATTGTGGCGG
CTCGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATTGAGGACGTCTTTACATCTTCAAGAGGATCGACTAAAACTCTCGGAAACTTCGTTAAGGCAACCTTTGACTGT
CTGCTGAAAACTTATGGCTTCTTAACACCTGAGTTTTGGAGGGAGACACGCTTCACAAAATCCCCATTCCAAGAGCACACAGATTTATTGGCAAAACCCACCGTCAAGGC
TTTATTGTTGGAAGAACCTGAGAGGGTCAATGCT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGCGCGGCGGATTTGGACGAGGCTTCGGCGGCAGAGGCCGCGGTGGTGACCGCGGCCGCGGAGGTCGCCGCCGGCCCGGACGACGCGACGAAGAGGAGAAGTG
GGTTCCAGTCACCAAGCTTGGGCGGCTCGTAAAAGAGGGCAAAATCCAGTCCTTGGAGCAGATCTACCTCCACTCTCTCCCCATTAAGGAACATCAGATCGTCGACACCC
TCGTTGGCCCCAGCCTCAAGGACGAGGTCATGAAGATTATGCCCGTCCAGAAGCAGACCCGCGCCGGACAGAGAACCCGATTCAAGGCCTTCGTCGTCGTCGGAGATGGT
AATGGCCATGTGGGTTTGGGAGTGAAGTGTAGTAAGGAGGTCGCCACTGCGATTCGTGGATCTATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTACTG
GGGTAACAAGATCGGTAAGCCCCATACAGTGCCGTGTAAGGTCACCGGAAAGTGTGGATCCGTCACCGTCCGGATGGTTCCGGCGCCTCGAGGTGCGGGGATTGTGGCGG
CTCGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATTGAGGACGTCTTTACATCTTCAAGAGGATCGACTAAAACTCTCGGAAACTTCGTTAAGGCAACCTTTGACTGT
CTGCTGAAAACTTATGGCTTCTTAACACCTGAGTTTTGGAGGGAGACACGCTTCACAAAATCCCCATTCCAAGAGCACACAGATTTATTGGCAAAACCCACCGTCAAGGC
TTTATTGTTGGAAGAACCTGAGAGGGTCAATGCT
Protein sequenceShow/hide protein sequence
MAERGGFGRGFGGRGRGGDRGRGGRRRPGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDG
NGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDC
LLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEEPERVNA