CuGenDBv2

Gene ID	MS000040
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome location	scaffold946_1:335999..336176
RNA-Seq Expression	MS000040
Synteny	MS000040
Gene Ontology terms	GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001516 - NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

QZL38642.1 NADH dehydrogenase subunit F [Citrullus naudinianus]

5.0e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

YP_009317433.1 NADH dehydrogenase subunit 5 [Coccinia grandis]

5.0e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

YP_009751868.1 NADH dehydrogenase subunit F [Indofevillea khasiana]

5.0e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

YP_009752215.1 NADH dehydrogenase subunit F [Linnaeosicyos amara]

3.8e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

YP_009752892.1 NADH dehydrogenase subunit F [Baijiania yunnanensis]

5.0e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LEA9 NAD(P)H dehydrogenase subunit 5

2.4e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

A0A1S4EU57 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.4e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

A0A249RZL2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.4e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

A0A6H0EUV7 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

1.8e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

A0A6M3RU93 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.4e-18

86.44

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GYLIDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

SwissProt top hits

e value

%identity

Alignment

Q09FR3 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

5.5e-20

86.21

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS
        VW  TIN+DFSLEFGYLIDPL  IM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMS
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS

Q09FZ9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

7.2e-20

84.48

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS
        VW  TIN+DFSLEFGYLIDPL  IM IL TTVGIMVL+YSDNYMSHDQGYLR FAYMS
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS

Q09WX1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.1e-19

81.03

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS
        +W  TIN+DFSLEFGYL+DPL  IM IL TTVGI+VLIYSDNYMSHDQGYLR FAYMS
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS

Q0ZIX1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

5.5e-20

86.21

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS
        VW  TIN+DFSLEFGYLIDPL  IM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMS
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMS

Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

1.9e-20

84.75

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL
        VW  TIN+DFSLE GY IDPL CIM IL TTVGIMVLIYSDNYMSHDQGYLR FAYMSL
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

Arabidopsis top hits

e value

%identity

Alignment

ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein

6.2e-19

78.95

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Query:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYM
        VW  TIN++FS EFGY IDPL  IM IL TTVGI+VLIYSDNYMSHDQGYLR FAYM
Subjt:  VWPSTINDDFSLEFGYLIDPLICIM-ILTTTVGIMVLIYSDNYMSHDQGYLRLFAYM

Sequences

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CDS sequence

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GTATGGCCTTCGACTATTAATGATGATTTTTCTTTAGAGTTTGGCTACTTGATCGATCCACTTATTTGTATTATGATATTAACCACAACCGTCGGAATTATGGTTCTTAT
TTATAGTGACAATTATATGTCTCATGATCAAGGATATTTGAGACTTTTTGCTTATATGAGTTTG

mRNA sequence

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GTATGGCCTTCGACTATTAATGATGATTTTTCTTTAGAGTTTGGCTACTTGATCGATCCACTTATTTGTATTATGATATTAACCACAACCGTCGGAATTATGGTTCTTAT
TTATAGTGACAATTATATGTCTCATGATCAAGGATATTTGAGACTTTTTGCTTATATGAGTTTG

Protein sequence

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VWPSTINDDFSLEFGYLIDPLICIMILTTTVGIMVLIYSDNYMSHDQGYLRLFAYMSL

MS000040 (gene) of Bitter gourd (TR) v1 genome