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MS000071 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000071
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description187-kDa microtubule-associated protein AIR9
Genome locationscaffold946_1:698379..698534
RNA-Seq ExpressionMS000071
SyntenyMS000071
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052496.1 187-kDa microtubule-associated protein AIR9 [Cucumis melo var. makuwa]9.0e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
TYK13328.1 187-kDa microtubule-associated protein AIR9 [Cucumis melo var. makuwa]9.0e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
XP_004134555.2 187-kDa microtubule-associated protein AIR9 [Cucumis sativus]9.0e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
XP_038881008.1 187-kDa microtubule-associated protein AIR9 isoform X1 [Benincasa hispida]9.0e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
XP_038881011.1 187-kDa microtubule-associated protein AIR9 isoform X2 [Benincasa hispida]9.0e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
TrEMBL top hitse value%identityAlignment
A0A1S4CT77 187-kDa microtubule-associated protein AIR9-like7.4e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E PSV  GIP  DKLE+E   FHT LYAV G YS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
A0A1S4DTK7 187-kDa microtubule-associated protein AIR94.3e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
A0A1U7WTJ5 187-kDa microtubule-associated protein AIR9 isoform X17.4e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E PSV  GIP  DKLE+E   FHT LYAV G YS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
A0A5A7UEA4 187-kDa microtubule-associated protein AIR94.3e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
A0A5D3CQ68 187-kDa microtubule-associated protein AIR94.3e-1171.15Show/hide
Query:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        E  SVL G+P  DKLE+E   FHT LYAV GTYS GK+GKSR QWLRSMVGS
Subjt:  EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
SwissProt top hitse value%identityAlignment
F4IIU4 187-kDa microtubule-associated protein AIR93.5e-1064.44Show/hide
Query:  GIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        G P  +KLE+E   FHT LYAV G Y  GK+GKS+ QWLRSMVGS
Subjt:  GIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
Arabidopsis top hitse value%identityAlignment
AT2G34680.1 Outer arm dynein light chain 1 protein2.5e-1164.44Show/hide
Query:  GIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS
        G P  +KLE+E   FHT LYAV G Y  GK+GKS+ QWLRSMVGS
Subjt:  GIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATTTCCATCGGTGTTGCTAGGAATTCCTATTTTTGATAAGCTGGAGTTAGAGGCCAGCAGTTTTCATACCATTTTATATGCAGTTCATGGCACTTATAGTAGAGGAAA
ACAAGGAAAGAGCAGATTCCAGTGGCTTAGGTCCATGGTTGGGAGT
mRNA sequenceShow/hide mRNA sequence
GAATTTCCATCGGTGTTGCTAGGAATTCCTATTTTTGATAAGCTGGAGTTAGAGGCCAGCAGTTTTCATACCATTTTATATGCAGTTCATGGCACTTATAGTAGAGGAAA
ACAAGGAAAGAGCAGATTCCAGTGGCTTAGGTCCATGGTTGGGAGT
Protein sequenceShow/hide protein sequence
EFPSVLLGIPIFDKLELEASSFHTILYAVHGTYSRGKQGKSRFQWLRSMVGS