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MS000072 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000072
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold946_1:709823..710122
RNA-Seq ExpressionMS000072
SyntenyMS000072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59358.1 hypothetical protein Csa_001260 [Cucumis sativus]7.5e-0648.57Show/hide
Query:  PPSRFHSPTPGAPSSGRRRRRRAESGASNGVG-----RRDRREDDNRGAPFEDSEREIWPPFSLLRPTTPPISP-----LFLSLLRILVLDERERRNQSG
        PPS FH P+  AP S RRR    +SGA+NG G      RDRRED +R   FEDSE EI PPF LLRPT   ISP     L L  L + V+   +   +  
Subjt:  PPSRFHSPTPGAPSSGRRRRRRAESGASNGVG-----RRDRREDDNRGAPFEDSEREIWPPFSLLRPTTPPISP-----LFLSLLRILVLDERERRNQSG

Query:  GRRER
         RRER
Subjt:  GRRER
TrEMBL top hitse value%identityAlignment
A0A0A0LC09 Uncharacterized protein3.6e-0648.57Show/hide
Query:  PPSRFHSPTPGAPSSGRRRRRRAESGASNGVG-----RRDRREDDNRGAPFEDSEREIWPPFSLLRPTTPPISP-----LFLSLLRILVLDERERRNQSG
        PPS FH P+  AP S RRR    +SGA+NG G      RDRRED +R   FEDSE EI PPF LLRPT   ISP     L L  L + V+   +   +  
Subjt:  PPSRFHSPTPGAPSSGRRRRRRAESGASNGVG-----RRDRREDDNRGAPFEDSEREIWPPFSLLRPTTPPISP-----LFLSLLRILVLDERERRNQSG

Query:  GRRER
         RRER
Subjt:  GRRER
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGCCGTCTCGATTCCACAGCCCGACACCTGGTGCGCCGTCGAGTGGCCGCCGCCGTCGTAGGCGTGCAGAATCTGGTGCAAGTAATGGTGTTGGTCGTCGTGATCGGAG
GGAGGATGATAATAGAGGCGCGCCGTTTGAGGACAGTGAGCGTGAAATCTGGCCGCCATTCTCACTCCTACGTCCAACAACTCCACCAATTTCGCCATTGTTTCTCTCTC
TACTGCGGATTTTGGTGCTTGATGAGAGAGAAAGAAGGAACCAGAGCGGCGGAAGGAGAGAGAGAGAGAGAGAAAGTGAA
mRNA sequenceShow/hide mRNA sequence
CCGCCGTCTCGATTCCACAGCCCGACACCTGGTGCGCCGTCGAGTGGCCGCCGCCGTCGTAGGCGTGCAGAATCTGGTGCAAGTAATGGTGTTGGTCGTCGTGATCGGAG
GGAGGATGATAATAGAGGCGCGCCGTTTGAGGACAGTGAGCGTGAAATCTGGCCGCCATTCTCACTCCTACGTCCAACAACTCCACCAATTTCGCCATTGTTTCTCTCTC
TACTGCGGATTTTGGTGCTTGATGAGAGAGAAAGAAGGAACCAGAGCGGCGGAAGGAGAGAGAGAGAGAGAGAAAGTGAA
Protein sequenceShow/hide protein sequence
PPSRFHSPTPGAPSSGRRRRRRAESGASNGVGRRDRREDDNRGAPFEDSEREIWPPFSLLRPTTPPISPLFLSLLRILVLDERERRNQSGGRRERERESE