; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000078 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000078
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWUSCHEL related homeobox 11
Genome locationscaffold946_1:770987..771232
RNA-Seq ExpressionMS000078
SyntenyMS000078
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0048830 - adventitious root development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR009057 - Homeobox-like domain superfamily
IPR044558 - WUSCHEL-related homeobox 11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596212.1 WUSCHEL-related homeobox 11, partial [Cucurbita argyrosperma subsp. sororia]7.0e-3498.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

KAG7027753.1 WUSCHEL-related homeobox 11, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-3498.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

XP_022946378.1 WUSCHEL-related homeobox 11-like [Cucurbita moschata]7.0e-3498.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

XP_022971585.1 WUSCHEL-related homeobox 11-like [Cucurbita maxima]1.2e-3398.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

XP_022983081.1 WUSCHEL-related homeobox 11-like [Cucurbita maxima]7.0e-3496.15Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGHHS
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H +
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGHHS

TrEMBL top hitse value%identityAlignment
A0A0A0LC01 Homeobox domain-containing protein5.8e-3498.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

A0A5D3DP68 WUSCHEL-related homeobox 11 isoform X15.8e-3498.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

A0A6J1G3L9 WUSCHEL-related homeobox 11-like3.4e-3498.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

A0A6J1I653 WUSCHEL-related homeobox 11-like5.8e-3498.68Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

A0A6J1J141 WUSCHEL-related homeobox 11-like3.4e-3496.15Show/hide
Query:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGHHS
        AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA H +
Subjt:  AEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGHHS

SwissProt top hitse value%identityAlignment
A2XG77 WUSCHEL-related homeobox 61.7e-3594.74Show/hide
Query:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA
        AA EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGDANVFYWFQNRRSRSRRRQRQ+QAAA
Subjt:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA

B8B644 WUSCHEL-related homeobox 113.8e-3594.74Show/hide
Query:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA
        AA EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGDANVFYWFQNRRSRSRRRQRQLQA A
Subjt:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA

Q0D3I7 WUSCHEL-related homeobox 113.8e-3594.74Show/hide
Query:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA
        AA EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGDANVFYWFQNRRSRSRRRQRQLQA A
Subjt:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA

Q10M29 WUSCHEL-related homeobox 61.7e-3594.74Show/hide
Query:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA
        AA EPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLE+FG+VGDANVFYWFQNRRSRSRRRQRQ+QAAA
Subjt:  AAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA

Q6X7J3 WUSCHEL-related homeobox 115.5e-3492Show/hide
Query:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA
        +AEPVRSRW+PKPEQILILESIF+SGMVNPPK+ETVRIRK+LEKFG+VGDANVFYWFQNRRSRSRRRQRQLQAAA
Subjt:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA

Arabidopsis top hitse value%identityAlignment
AT2G33880.1 homeobox-35.0e-2263.89Show/hide
Query:  RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH
        + RW PKPEQI ILE+IFNSGMVNPP++E  RIR  L+++G VGDANVFYWFQNR+SRS+ + R L   + H
Subjt:  RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGH

AT3G03660.1 WUSCHEL related homeobox 113.9e-3592Show/hide
Query:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA
        +AEPVRSRW+PKPEQILILESIF+SGMVNPPK+ETVRIRK+LEKFG+VGDANVFYWFQNRRSRSRRRQRQLQAAA
Subjt:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA

AT3G03660.2 WUSCHEL related homeobox 113.9e-3592Show/hide
Query:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA
        +AEPVRSRW+PKPEQILILESIF+SGMVNPPK+ETVRIRK+LEKFG+VGDANVFYWFQNRRSRSRRRQRQLQAAA
Subjt:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAA

AT5G17810.1 WUSCHEL related homeobox 128.2e-3387.84Show/hide
Query:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAA
        + EPVR+RW+PKPEQILILESIFNSG VNPPKDETVRIRK+LEKFG+VGDANVFYWFQNRRSRSRRR RQL AA
Subjt:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAA

AT5G17810.2 WUSCHEL related homeobox 128.2e-3387.84Show/hide
Query:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAA
        + EPVR+RW+PKPEQILILESIFNSG VNPPKDETVRIRK+LEKFG+VGDANVFYWFQNRRSRSRRR RQL AA
Subjt:  AAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAGGGCGGCGGCGGAGCCGGTGAGATCGCGGTGGACGCCGAAGCCGGAGCAGATTCTGATCCTTGAGTCCATCTTCAACAGCGGCATGGTCAATCCTCCCAAAGATGA
AACTGTGAGGATAAGAAAGCTGCTTGAAAAATTTGGCTCCGTTGGAGATGCCAATGTTTTCTACTGGTTCCAGAACCGCCGTTCCCGCTCCCGCCGCCGCCAGCGCCAGC
TCCAGGCTGCCGCTGGCCACCACTCC
mRNA sequenceShow/hide mRNA sequence
GAGAGGGCGGCGGCGGAGCCGGTGAGATCGCGGTGGACGCCGAAGCCGGAGCAGATTCTGATCCTTGAGTCCATCTTCAACAGCGGCATGGTCAATCCTCCCAAAGATGA
AACTGTGAGGATAAGAAAGCTGCTTGAAAAATTTGGCTCCGTTGGAGATGCCAATGTTTTCTACTGGTTCCAGAACCGCCGTTCCCGCTCCCGCCGCCGCCAGCGCCAGC
TCCAGGCTGCCGCTGGCCACCACTCC
Protein sequenceShow/hide protein sequence
ERAAAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAAGHHS