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MS000089 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000089
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHVA22-like protein
Genome locationscaffold946_1:919552..919674
RNA-Seq ExpressionMS000089
SyntenyMS000089
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0042538 - hyperosmotic salinity response (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004345 - TB2/DP1/HVA22-related protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDP12337.1 unnamed protein product [Coffea canephora]4.1e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYW+L+SMITLFELTF+KI EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

XP_002275428.1 PREDICTED: HVA22-like protein a isoform X1 [Vitis vinifera]4.1e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYWVL+SMITLFELTF+K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

XP_022137380.1 HVA22-like protein a [Momordica charantia]9.9e-1390.24Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK PTDDQQWLTYWVLHSMITLFELTFSK+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

XP_031104417.1 HVA22-like protein a [Ipomoea triloba]4.1e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYWVL+SMITLFELTF+K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

XP_040989196.1 HVA22-like protein a [Juglans microcarpa x Juglans regia]4.1e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYWVL+SMITLFELTF+K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

TrEMBL top hitse value%identityAlignment
A0A068UVL4 HVA22-like protein2.0e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYW+L+SMITLFELTF+KI EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

A0A218Y1J4 HVA22-like protein2.0e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYWVLHS+ITLFELTF K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

A0A438I196 HVA22-like protein a2.0e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYWVL+SMITLFELTF+K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

A0A6J1C6H3 HVA22-like protein4.8e-1390.24Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK PTDDQQWLTYWVLHSMITLFELTFSK+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

A5BHW6 HVA22-like protein2.0e-1182.93Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YASIRAI+TK P DDQQWLTYWVL+SMITLFELTF+K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

SwissProt top hitse value%identityAlignment
Q682H0 HVA22-like protein f1.7e-0753.66Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS RAI++    DDQQWLTYW+++S+IT+FEL+  ++  W
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

Q9FED2 HVA22-like protein e7.1e-0648.78Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS+ AI++    DD+QWL YW+L+S +TL EL    + EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

Q9S784 HVA22-like protein c1.4e-0963.41Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS++AI+T+   +D+QWLTYWVL+++I+LFELTFSK  EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

Q9S7V4 HVA22-like protein a4.8e-1063.41Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS++AI+T+   DD+QWLTYWVL+S++TL ELTF+K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

Q9SYX7 HVA22-like protein b5.3e-0960.98Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS+RAI+++   DD+QWLTYW L+S+I LFELTF ++ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

Arabidopsis top hitse value%identityAlignment
AT1G69700.1 HVA22 homologue C9.8e-1163.41Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS++AI+T+   +D+QWLTYWVL+++I+LFELTFSK  EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

AT1G74520.1 HVA22 homologue A3.4e-1163.41Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS++AI+T+   DD+QWLTYWVL+S++TL ELTF+K+ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

AT2G42820.1 HVA22-like protein F1.2e-0853.66Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS RAI++    DDQQWLTYW+++S+IT+FEL+  ++  W
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

AT5G50720.1 HVA22 homologue E5.1e-0748.78Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS+ AI++    DD+QWL YW+L+S +TL EL    + EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW

AT5G62490.1 HVA22 homologue B3.7e-1060.98Show/hide
Query:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW
        YAS+RAI+++   DD+QWLTYW L+S+I LFELTF ++ EW
Subjt:  YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATGCCTCAATCAGAGCCATCAAGACCAAATATCCCACCGACGATCAGCAATGGCTTACTTACTGGGTTTTGCACTCCATGATTACTCTCTTCGAGCTGACCTTCTCCAA
GATTCATGAATGG
mRNA sequenceShow/hide mRNA sequence
TATGCCTCAATCAGAGCCATCAAGACCAAATATCCCACCGACGATCAGCAATGGCTTACTTACTGGGTTTTGCACTCCATGATTACTCTCTTCGAGCTGACCTTCTCCAA
GATTCATGAATGG
Protein sequenceShow/hide protein sequence
YASIRAIKTKYPTDDQQWLTYWVLHSMITLFELTFSKIHEW