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MS000120 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000120
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold905:85027..85646
RNA-Seq ExpressionMS000120
SyntenyMS000120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143616.1 uncharacterized protein LOC111013476 [Momordica charantia]2.3e-0638.05Show/hide
Query:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN
        M+ LK     +G  KT++E+M  VL KRS+Y   M YGPKP +++  S+  S +Y+++LEARL K     E      +++IQ+ LE Q Q F R+   + 
Subjt:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN

Query:  DIPERFIGGGSSS
        ++ + F+ GG SS
Subjt:  DIPERFIGGGSSS
XP_022148911.1 uncharacterized protein LOC111017461 [Momordica charantia]2.3e-0638.05Show/hide
Query:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN
        M+ LK     +G  KT++E+M  VL KRS+Y   M YGPKP +++  S+  S +Y+++LEARL K     E      +++IQ+ LE Q Q F R+   + 
Subjt:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN

Query:  DIPERFIGGGSSS
        ++ + F+ GG SS
Subjt:  DIPERFIGGGSSS
TrEMBL top hitse value%identityAlignment
A0A6J1CQT5 uncharacterized protein LOC1110134761.1e-0638.05Show/hide
Query:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN
        M+ LK     +G  KT++E+M  VL KRS+Y   M YGPKP +++  S+  S +Y+++LEARL K     E      +++IQ+ LE Q Q F R+   + 
Subjt:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN

Query:  DIPERFIGGGSSS
        ++ + F+ GG SS
Subjt:  DIPERFIGGGSSS
A0A6J1D6S9 uncharacterized protein LOC1110174611.1e-0638.05Show/hide
Query:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN
        M+ LK     +G  KT++E+M  VL KRS+Y   M YGPKP +++  S+  S +Y+++LEARL K     E      +++IQ+ LE Q Q F R+   + 
Subjt:  MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQ-ESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQIN

Query:  DIPERFIGGGSSS
        ++ + F+ GG SS
Subjt:  DIPERFIGGGSSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATCTTAAAACAAGTAGAAGAAGATGAAGGCACTTCAAAAACTGATAAAGAAGTTATGGGTATGGTCCTTGAAAAAAGATCCTCGTACACGAAAAAAATGAGATA
TGGACCAAAACCACAACAAAGTCAAGAATCAGCACCTTGCTCACAAAAGTATCTTCAAACCCTAGAGGCACGTCTTGCAAAGGTCTACACTTTATTAGAGAGTCAACGTG
AAGAACAGCGAAAAGAAATACAAGAATTGTTGGAATGTCAGCACCAGATATTTGAAAGAAGATTTAGTCAAATCAATGACATTCCAGAGAGATTTATTGGAGGAGGGAGT
TCATCACTCAAGTAT
mRNA sequenceShow/hide mRNA sequence
ATGTTAATCTTAAAACAAGTAGAAGAAGATGAAGGCACTTCAAAAACTGATAAAGAAGTTATGGGTATGGTCCTTGAAAAAAGATCCTCGTACACGAAAAAAATGAGATA
TGGACCAAAACCACAACAAAGTCAAGAATCAGCACCTTGCTCACAAAAGTATCTTCAAACCCTAGAGGCACGTCTTGCAAAGGTCTACACTTTATTAGAGAGTCAACGTG
AAGAACAGCGAAAAGAAATACAAGAATTGTTGGAATGTCAGCACCAGATATTTGAAAGAAGATTTAGTCAAATCAATGACATTCCAGAGAGATTTATTGGAGGAGGGAGT
TCATCACTCAAGTAT
Protein sequenceShow/hide protein sequence
MLILKQVEEDEGTSKTDKEVMGMVLEKRSSYTKKMRYGPKPQQSQESAPCSQKYLQTLEARLAKVYTLLESQREEQRKEIQELLECQHQIFERRFSQINDIPERFIGGGS
SSLKY