; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000123 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000123
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP23-like
Genome locationscaffold905:104059..104895
RNA-Seq ExpressionMS000123
SyntenyMS000123
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008350478.1 F-box protein SKIP23-like [Malus domestica]2.1e-4537.78Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN
        DWT LP +L   ++  L  Y DY+RFR V  SW   +P+ P H    +P LM+P    N +HR F+N+ N +V++L LP+ +++K   GSS+GWLV LD 
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN

Query:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT
          ++ L+NPLT+++  LPP+S+FP ++ +D + +G EY L  P   + T+S  ++   +++K+VLSS    A    F AVAI + +  LAF + GD  WT
Subjt:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER
         I  + +   D I  +G  YAV+  G + VC ++      V + ++ P+LE     YLV +  DLL+V R
Subjt:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER

XP_008377114.1 F-box protein SKIP23-like [Malus domestica]9.3e-4637.78Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN
        DWT LP +L   ++  L  Y DY+RFR V  SW   +P+ P H    +P LM+P    N +HR F+N+ N +V++L LP+ +++K   GSS+GWLV LD 
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN

Query:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT
          ++ L+NPLT+++  LPP+S+FP ++ +D +++G EY L+ P   + T+S  ++   +++K+VLSS    A    F AVAI + +  LAF + GD  WT
Subjt:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER
         I  + +   D +  DG  YAV+  G +  C ++      V L ++ P+LE     YLV +  DLL+V R
Subjt:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER

XP_022155366.1 F-box protein SKIP23-like [Momordica charantia]1.2e-15496.42Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        M +WTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHN N RGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPP SSFPGII YDPNN GEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG
        STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLY+VETNGDLLMVERLSKYMA+FNRG
Subjt:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG

XP_022155372.1 F-box protein SKIP23-like [Momordica charantia]4.6e-15496.42Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        MADWT+LPTDLLLQVAHYLD YTDYVRFRAVRRSWG VLPRQPRHSYYNIPCLMIPYHPHNDN RGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPPISSFPGII YDPNN GEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG
        STSLNNFHDCIYFDGKIYAVNVLGDLGVCSID TPTQLVNLPLKRPKLEVTSKLYLVETNGD+LMVERLSKYMA+FNRG
Subjt:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG

XP_022156879.1 putative F-box protein At4g17565 [Momordica charantia]5.6e-5145.74Show/hide
Query:  WTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL
        W +LP D+L  +  +L+  +DY+RFRAV  S    LP+ P+H YY +P LMIP+   +   RGF+N LNQ++Y  +L +++  + +GSSNGWLV LDN  
Subjt:  WTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL

Query:  TLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS
        TL+L NPLTK QLQLP  SSFP     DP      Y +  P  +I+ ++   V   Y+ KI L  L   + F+AVAIY+   K+AFTK GDDKWTAI TS
Subjt:  TLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS

Query:  LNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG
          +  DCI F  KIYA+    DL V  IDD PTQ+  + +K      R +L + S LYLV  + +LLMVERL K   +  RG
Subjt:  LNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG

TrEMBL top hitse value%identityAlignment
A0A498JA82 DUF295 domain-containing protein2.9e-4537.78Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN
        DWT LP +L   ++  L  Y DY+RFR V  SW   +P+ P H    +P LM+P    N +HR F+N+ N +V++L LP+ +++K   GSS+GWLV LD 
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN

Query:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT
          ++ L+NPLT+++  LPP+S+FP +I +D +++G EY L+ P   + T+S   +   +++K+VLSS    A    F AVAI + +  LAF + GD  WT
Subjt:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER
         I  + +   D +  +G  YAV+  G +  C ++      V L ++ P+LE     YLV +  DLL+V R
Subjt:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER

A0A5N5HRZ9 tRNA pseudouridine synthase A2.9e-4537.04Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN
        DWT LP +L   ++  L  Y DY+RFR V  SW   +P+ P H    +P LM+P    N +HR F+++ N +V++L LP+ +++K   GSS+GWLV LD 
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN

Query:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT
          ++ L+NPLT+++  LPP+S+FP ++ +D +++G EY L+ P   + T+S  ++   +++K+VLSS    A    F AVAI + +  LAF + GD  WT
Subjt:  GLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSL---APSNDFMAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER
         I  + +   D +  +G  YAV+  G +  C ++      V L ++ P+LE     YLV +  DLL+V R
Subjt:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER

A0A6J1DP54 F-box protein SKIP23-like2.2e-15496.42Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        MADWT+LPTDLLLQVAHYLD YTDYVRFRAVRRSWG VLPRQPRHSYYNIPCLMIPYHPHNDN RGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPPISSFPGII YDPNN GEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG
        STSLNNFHDCIYFDGKIYAVNVLGDLGVCSID TPTQLVNLPLKRPKLEVTSKLYLVETNGD+LMVERLSKYMA+FNRG
Subjt:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG

A0A6J1DRH7 F-box protein SKIP23-like5.9e-15596.42Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        M +WTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHN N RGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPP SSFPGII YDPNN GEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG
        STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLY+VETNGDLLMVERLSKYMA+FNRG
Subjt:  STSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG

A0A6J1DUW8 putative F-box protein At4g175652.7e-5145.74Show/hide
Query:  WTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL
        W +LP D+L  +  +L+  +DY+RFRAV  S    LP+ P+H YY +P LMIP+   +   RGF+N LNQ++Y  +L +++  + +GSSNGWLV LDN  
Subjt:  WTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL

Query:  TLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS
        TL+L NPLTK QLQLP  SSFP     DP      Y +  P  +I+ ++   V   Y+ KI L  L   + F+AVAIY+   K+AFTK GDDKWTAI TS
Subjt:  TLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAISTS

Query:  LNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG
          +  DCI F  KIYA+    DL V  IDD PTQ+  + +K      R +L + S LYLV  + +LLMVERL K   +  RG
Subjt:  LNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG

SwissProt top hitse value%identityAlignment
Q3EBZ2 F-box protein SKIP238.2e-1328.27Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVL-PRQPRHSYYNIPCLMIPYHPHN------DNHRGFYNVLNQQVYYLELPQLTNQKYIGS-S
        M DW+ LP DLL  ++  L++  D ++FR+V  SW     P+ P      +P   +P  P N      D+  GF   L+Q+   L  P   ++  I S S
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVL-PRQPRHSYYNIPCLMIPYHPHN------DNHRGFYNVLNQQVYYLELPQLTNQKYIGS-S

Query:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGII---VYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAI-YDSS
         GWL+ ++  L     + LL+PL  ++  +P   +FP ++    +    LG E+ L       NT     V   Y+ K V+  L    D+  V +    S
Subjt:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGII---VYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAI-YDSS

Query:  DKLAFTKFGDDKWTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVE
         KLA  +  D  WT I+   + + D + FDG+ +AV+  G   V         LV  P+         K +L+E+ G++L+V+
Subjt:  DKLAFTKFGDDKWTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVE

Q9FLP7 Putative F-box protein At5g551502.2e-1023.88Show/hide
Query:  ADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYN---IPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT
        + W+    +LL  V H L+   D +    V  SW           YY+    P L I +   N+  R      + Q   L   +L    + G+   W+  
Subjt:  ADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYN---IPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT

Query:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWT
          + L   L  P+TKS   LPP+ SF      D   L +   ++   + +           +I+K V S+    ++++ + IY++  KLAF + GD +WT
Subjt:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV
         + +  ++  D ++ +G  +A++ LG++  C +     +   L    P    + K YL E++ D L V
Subjt:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV

Q9LS04 Putative F-box protein At3g257509.1e-0421.66Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNG
        +W++LP +LL  +A+   +  D +R R+  +SW   +        +        Y P   N +   ++     + + LP     K      GWLV     
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNG

Query:  ----LTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKS---RARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDD
              + LL PL+  ++          ++    + + + Y  ++  D +  +     + +   YI+         S+   +V  +D+      T+ G  
Subjt:  ----LTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKS---RARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDD

Query:  KWTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTP--TQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLS
         WT I   + +F D I   G+IYAV++ G +   S+       Q  + PL   K +      LVE  GDL +V  LS
Subjt:  KWTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTP--TQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLS

Q9SHX9 Putative F-box protein At1g657707.0e-0427.64Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLP-RQPRHSYYNIPCLMIPYHPHN--DNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLV
        MADW+ LP DLL  +A  L +  +  RFR++ RSW   +P    ++ +   P +++  +P+    +HR     L++  ++    ++T       S GWL+
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLP-RQPRHSYYNIPCLMIPYHPHN--DNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLV

Query:  TLDNGLT---LQLLNPLTKSQLQ
          D  ++   L LL+PL++  ++
Subjt:  TLDNGLT---LQLLNPLTKSQLQ

Q9ZPS0 F-box only protein 79.1e-0422.03Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVL--------NQQVYYLELPQLTNQKY-IGSSN
        DW+ L  D+L ++   L +  D+ R + V   W  V             C+  P  P    +R  Y +         ++   Y  L  ++++ Y + SS 
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVL--------NQQVYYLELPQLTNQKY-IGSSN

Query:  GWLVTLDNGLTLQLLNPLTKSQLQLPPISS----FPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAF
         WL+  D+ L   ++N LT  ++ LPP+ S         V         Y      + I    +     +  R  VL     + D+    I+ +   L  
Subjt:  GWLVTLDNGLTLQLLNPLTKSQLQLPPISS----FPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAF

Query:  TKFGDDKWT-AISTSLNNFHDCIYFDGKIYAVNV---------LGDLGVCSIDDTPTQLVNLPL---KRPKLEVTSKLYLVETNGDLLMVERLSK
         K GDD W      +   + D  Y + K+Y  N           GD     I++ P    N PL   + P   + SK   ++ +G++L++ R+ K
Subjt:  TKFGDDKWT-AISTSLNNFHDCIYFDGKIYAVNV---------LGDLGVCSIDDTPTQLVNLPL---KRPKLEVTSKLYLVETNGDLLMVERLSK

Arabidopsis top hitse value%identityAlignment
AT1G65770.1 ascorbic acid mannose pathway regulator 15.0e-0527.64Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLP-RQPRHSYYNIPCLMIPYHPHN--DNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLV
        MADW+ LP DLL  +A  L +  +  RFR++ RSW   +P    ++ +   P +++  +P+    +HR     L++  ++    ++T       S GWL+
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLP-RQPRHSYYNIPCLMIPYHPHN--DNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLV

Query:  TLDNGLT---LQLLNPLTKSQLQ
          D  ++   L LL+PL++  ++
Subjt:  TLDNGLT---LQLLNPLTKSQLQ

AT2G03560.1 F-box family protein with a domain of unknown function (DUF295)6.5e-0522.03Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVL--------NQQVYYLELPQLTNQKY-IGSSN
        DW+ L  D+L ++   L +  D+ R + V   W  V             C+  P  P    +R  Y +         ++   Y  L  ++++ Y + SS 
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVL--------NQQVYYLELPQLTNQKY-IGSSN

Query:  GWLVTLDNGLTLQLLNPLTKSQLQLPPISS----FPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAF
         WL+  D+ L   ++N LT  ++ LPP+ S         V         Y      + I    +     +  R  VL     + D+    I+ +   L  
Subjt:  GWLVTLDNGLTLQLLNPLTKSQLQLPPISS----FPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAF

Query:  TKFGDDKWT-AISTSLNNFHDCIYFDGKIYAVNV---------LGDLGVCSIDDTPTQLVNLPL---KRPKLEVTSKLYLVETNGDLLMVERLSK
         K GDD W      +   + D  Y + K+Y  N           GD     I++ P    N PL   + P   + SK   ++ +G++L++ R+ K
Subjt:  TKFGDDKWT-AISTSLNNFHDCIYFDGKIYAVNV---------LGDLGVCSIDDTPTQLVNLPL---KRPKLEVTSKLYLVETNGDLLMVERLSK

AT2G17030.1 F-box family protein with a domain of unknown function (DUF295)5.9e-1428.27Show/hide
Query:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVL-PRQPRHSYYNIPCLMIPYHPHN------DNHRGFYNVLNQQVYYLELPQLTNQKYIGS-S
        M DW+ LP DLL  ++  L++  D ++FR+V  SW     P+ P      +P   +P  P N      D+  GF   L+Q+   L  P   ++  I S S
Subjt:  MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVL-PRQPRHSYYNIPCLMIPYHPHN------DNHRGFYNVLNQQVYYLELPQLTNQKYIGS-S

Query:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGII---VYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAI-YDSS
         GWL+ ++  L     + LL+PL  ++  +P   +FP ++    +    LG E+ L       NT     V   Y+ K V+  L    D+  V +    S
Subjt:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGII---VYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAI-YDSS

Query:  DKLAFTKFGDDKWTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVE
         KLA  +  D  WT I+   + + D + FDG+ +AV+  G   V         LV  P+         K +L+E+ G++L+V+
Subjt:  DKLAFTKFGDDKWTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVE

AT2G26160.1 F-box family protein with a domain of unknown function (DUF295)1.5e-0620.48Show/hide
Query:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLV---TL
        +W+ LP DL+   A+   + +D +R R++ + W       P+    N+P           +++    VL+   ++    ++T      S  GWL+    +
Subjt:  DWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLV---TL

Query:  DNGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDS-------SDKLAFTKF
             + LL+P  +    L P      ++ ++ + + + Y +              +  +Y+ + V+    PS+    V   D+        DK+   K 
Subjt:  DNGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDS-------SDKLAFTKF

Query:  GDDK---WTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLV----NLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNR
        G++    WT I   + +F D I   G++YA+++ G +   S+  +P  L+    ++P+     +  +K  LVE  GDL ++ +L    A   R
Subjt:  GDDK---WTAISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLV----NLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNR

AT5G55150.1 Protein of unknown function (DUF295)1.6e-1123.88Show/hide
Query:  ADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYN---IPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT
        + W+    +LL  V H L+   D +    V  SW           YY+    P L I +   N+  R      + Q   L   +L    + G+   W+  
Subjt:  ADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYN---IPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT

Query:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWT
          + L   L  P+TKS   LPP+ SF      D   L +   ++   + +           +I+K V S+    ++++ + IY++  KLAF + GD +WT
Subjt:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV
         + +  ++  D ++ +G  +A++ LG++  C +     +   L    P    + K YL E++ D L V
Subjt:  AISTSLNNFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTGGACCAATCTTCCTACTGATCTCCTACTCCAAGTTGCACATTATTTAGATACGTACACCGATTACGTTCGATTTCGAGCAGTTCGTCGATCGTGGGGGCA
CGTTTTGCCGAGGCAACCCCGACACTCGTACTACAACATCCCATGCCTCATGATTCCCTACCATCCTCACAATGACAATCATCGAGGTTTCTACAATGTTTTAAACCAAC
AAGTTTACTACTTGGAGTTGCCTCAACTTACAAATCAAAAATACATTGGCTCTTCCAATGGTTGGTTAGTGACTTTGGACAATGGTTTGACATTGCAACTCTTGAATCCT
CTTACCAAGTCTCAACTCCAACTCCCTCCCATATCTTCATTTCCTGGCATCATAGTGTATGATCCTAATAATCTAGGAGAAGAGTATACTCTTCTTCGTCCTATGGATAA
GATCAATACCAAAAGTCGAGCTCGTGTCCATGGTGAATATATAAGGAAAATTGTTTTGTCCTCTCTCGCCCCTTCAAATGATTTTATGGCTGTCGCCATATATGATTCAT
CCGACAAGTTGGCTTTTACGAAGTTTGGTGATGATAAATGGACTGCAATTTCTACATCATTGAATAATTTTCATGATTGCATATATTTTGACGGAAAAATTTATGCAGTA
AATGTTCTCGGAGACCTAGGGGTCTGTTCCATCGACGACACTCCGACCCAGCTGGTAAACTTGCCCTTAAAACGACCTAAGTTGGAGGTGACATCTAAGTTGTATCTGGT
TGAAACAAATGGTGATCTGTTGATGGTTGAAAGGCTTTCAAAGTACATGGCTATTTTTAATAGAGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTGGACCAATCTTCCTACTGATCTCCTACTCCAAGTTGCACATTATTTAGATACGTACACCGATTACGTTCGATTTCGAGCAGTTCGTCGATCGTGGGGGCA
CGTTTTGCCGAGGCAACCCCGACACTCGTACTACAACATCCCATGCCTCATGATTCCCTACCATCCTCACAATGACAATCATCGAGGTTTCTACAATGTTTTAAACCAAC
AAGTTTACTACTTGGAGTTGCCTCAACTTACAAATCAAAAATACATTGGCTCTTCCAATGGTTGGTTAGTGACTTTGGACAATGGTTTGACATTGCAACTCTTGAATCCT
CTTACCAAGTCTCAACTCCAACTCCCTCCCATATCTTCATTTCCTGGCATCATAGTGTATGATCCTAATAATCTAGGAGAAGAGTATACTCTTCTTCGTCCTATGGATAA
GATCAATACCAAAAGTCGAGCTCGTGTCCATGGTGAATATATAAGGAAAATTGTTTTGTCCTCTCTCGCCCCTTCAAATGATTTTATGGCTGTCGCCATATATGATTCAT
CCGACAAGTTGGCTTTTACGAAGTTTGGTGATGATAAATGGACTGCAATTTCTACATCATTGAATAATTTTCATGATTGCATATATTTTGACGGAAAAATTTATGCAGTA
AATGTTCTCGGAGACCTAGGGGTCTGTTCCATCGACGACACTCCGACCCAGCTGGTAAACTTGCCCTTAAAACGACCTAAGTTGGAGGTGACATCTAAGTTGTATCTGGT
TGAAACAAATGGTGATCTGTTGATGGTTGAAAGGCTTTCAAAGTACATGGCTATTTTTAATAGAGGT
Protein sequenceShow/hide protein sequence
MADWTNLPTDLLLQVAHYLDTYTDYVRFRAVRRSWGHVLPRQPRHSYYNIPCLMIPYHPHNDNHRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGLTLQLLNP
LTKSQLQLPPISSFPGIIVYDPNNLGEEYTLLRPMDKINTKSRARVHGEYIRKIVLSSLAPSNDFMAVAIYDSSDKLAFTKFGDDKWTAISTSLNNFHDCIYFDGKIYAV
NVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSKYMAIFNRG