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MS000196 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000196
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box family protein
Genome locationscaffold251:69143..69307
RNA-Seq ExpressionMS000196
SyntenyMS000196
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582587.1 F-box protein PP2-A13, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1163.64Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLP NYQFLMDK  E +++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

XP_022147516.1 F-box protein PP2-A13-like [Momordica charantia]1.3e-1270.91Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMHLD PEIC+LAGVN  F  +  AD  WE KLPSNYQFLMDK SELD + K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

XP_022974087.1 F-box protein PP2-A13-like [Cucurbita maxima]1.9e-1165.45Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLPSNYQFL+DK  EL+++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

XP_022980370.1 F-box protein PP2-A13-like [Cucurbita maxima]4.3e-1163.64Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLP NYQFLMDK  E +++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

XP_023527763.1 F-box protein PP2-A13-like [Cucurbita pepo subsp. pepo]4.3e-1163.64Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLP NYQFLMDK  E +++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

TrEMBL top hitse value%identityAlignment
A0A6J1D2L7 F-box protein PP2-A13-like6.4e-1370.91Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMHLD PEIC+LAGVN  F  +  AD  WE KLPSNYQFLMDK SELD + K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

A0A6J1ECW2 F-box protein PP2-A13-like2.1e-1163.64Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLP NYQFLMDK  E +++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

A0A6J1FNZ3 F-box protein PP2-A13-like2.7e-1163.64Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLPSNYQFL+DK  E +++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

A0A6J1I9B1 F-box protein PP2-A13-like9.2e-1265.45Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLPSNYQFL+DK  EL+++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

A0A6J1IW34 F-box protein PP2-A13-like2.1e-1163.64Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK
        ALVLMH+D PEIC+LAGVN  F  +  AD  WESKLP NYQFLMDK  E +++ K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK

SwissProt top hitse value%identityAlignment
Q9CAN4 F-box protein PP2-A111.6e-0545.65Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK
        AL+L +LD  EICR + +N  F  +  AD  WESKLP +Y+ +++K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK

Q9FJ80 F-box protein PP2-A143.3e-0646.81Show/hide
Query:  VLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSE
        + M+++ PEIC LA VN  F  + ++D  WE KLPSNY+FL+ +  E
Subjt:  VLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSE

Q9LEX0 F-box protein PP2-A133.0e-0752.17Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK
        AL++  LD PEICRLA +N  F  +  AD  WESKLP+NY+ +  K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK

Q9LF92 F-box protein PP2-A153.9e-0753.33Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMD
        A V M+L  PEIC LAG+N  F  +  +D  WE KLP NYQ L+D
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMD

Q9LN77 F-box protein PP2-A126.2e-0543.48Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK
        A+++ +LD  EICR + +N  F  +  AD  WESKLP NY+ +++K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK

Arabidopsis top hitse value%identityAlignment
AT1G63090.1 phloem protein 2-A111.2e-0645.65Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK
        AL+L +LD  EICR + +N  F  +  AD  WESKLP +Y+ +++K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK

AT3G53000.1 phloem protein 2-A152.8e-0853.33Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMD
        A V M+L  PEIC LAG+N  F  +  +D  WE KLP NYQ L+D
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMD

AT3G61060.1 phloem protein 2-A132.1e-0852.17Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK
        AL++  LD PEICRLA +N  F  +  AD  WESKLP+NY+ +  K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK

AT3G61060.2 phloem protein 2-A132.1e-0852.17Show/hide
Query:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK
        AL++  LD PEICRLA +N  F  +  AD  WESKLP+NY+ +  K
Subjt:  ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDK

AT5G52120.1 phloem protein 2-A142.3e-0746.81Show/hide
Query:  VLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSE
        + M+++ PEIC LA VN  F  + ++D  WE KLPSNY+FL+ +  E
Subjt:  VLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCTGGTTCTGATGCATTTGGACTCGCCGGAGATTTGCAGATTGGCCGGAGTCAACGGTTATTTCGCAGCGTCGCGTAAGGCGGATCTCACATGGGAATCCAAATTGCC
TTCAAACTATCAATTTCTGATGGACAAAACATCGGAGCTCGACAAAAGAAGAAAG
mRNA sequenceShow/hide mRNA sequence
GCTCTGGTTCTGATGCATTTGGACTCGCCGGAGATTTGCAGATTGGCCGGAGTCAACGGTTATTTCGCAGCGTCGCGTAAGGCGGATCTCACATGGGAATCCAAATTGCC
TTCAAACTATCAATTTCTGATGGACAAAACATCGGAGCTCGACAAAAGAAGAAAG
Protein sequenceShow/hide protein sequence
ALVLMHLDSPEICRLAGVNGYFAASRKADLTWESKLPSNYQFLMDKTSELDKRRK