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MS000197 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000197
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein PP2-A13-like
Genome locationscaffold251:74852..75022
RNA-Seq ExpressionMS000197
SyntenyMS000197
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582587.1 F-box protein PP2-A13, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1677.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP EIC+LAGVNR+FRG ASADFIWE KLP +YQFLMDKA E + K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

XP_022147516.1 F-box protein PP2-A13-like [Momordica charantia]6.1e-2189.47Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMHLDP EIC+LAGVNRLFRG ASADFIWE+KLPS+YQFLMDKASELDGK
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

XP_022924583.1 F-box protein PP2-A13-like [Cucurbita moschata]1.2e-1677.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP EIC+LAGVNR+FRG ASADFIWE KLP +YQFLMDKA E + K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

XP_022980370.1 F-box protein PP2-A13-like [Cucurbita maxima]1.2e-1677.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP EIC+LAGVNR+FRG ASADFIWE KLP +YQFLMDKA E + K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

XP_023527763.1 F-box protein PP2-A13-like [Cucurbita pepo subsp. pepo]1.2e-1677.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP EIC+LAGVNR+FRG ASADFIWE KLP +YQFLMDKA E + K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

TrEMBL top hitse value%identityAlignment
A0A0A0L7J2 F-box domain-containing protein9.9e-1777.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP+EIC+LAGVNRLFR  ASADFIWE KLP +YQFLMDK  E D K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

A0A6J1D2L7 F-box protein PP2-A13-like3.0e-2189.47Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMHLDP EIC+LAGVNRLFRG ASADFIWE+KLPS+YQFLMDKASELDGK
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

A0A6J1ECW2 F-box protein PP2-A13-like5.8e-1777.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP EIC+LAGVNR+FRG ASADFIWE KLP +YQFLMDKA E + K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

A0A6J1I9B1 F-box protein PP2-A13-like5.8e-1777.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP EIC+LAGVNRLFR  ASADF+WE KLPS+YQFL+DKA EL+ K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

A0A6J1IW34 F-box protein PP2-A13-like5.8e-1777.19Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK
        E CVALVLMH+DP EIC+LAGVNR+FRG ASADFIWE KLP +YQFLMDKA E + K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK

SwissProt top hitse value%identityAlignment
Q9CAN4 F-box protein PP2-A118.6e-1052Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK
        E CVAL+L +LDP EICR + +N  F G + ADF+WE KLP  Y+ +++K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK

Q9FJ80 F-box protein PP2-A141.4e-0743.4Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASE
        E C+  + M+++P EIC LA VN+ F   + +D +WE KLPS+Y+FL+ +  E
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASE

Q9LEX0 F-box protein PP2-A132.1e-1160Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK
        E CVAL++  LDP EICRLA +NR+FR  +SADFIWE KLP++Y+ +  K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK

Q9LF92 F-box protein PP2-A151.6e-1163.27Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMD
        E CVA V M+L P EIC LAG+NR FRG AS+D +WE KLP +YQ L+D
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMD

Q9LN77 F-box protein PP2-A122.5e-0950Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK
        E CVA+++ +LDP EICR + +NR FRG + AD +WE KLP +Y+ +++K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK

Arabidopsis top hitse value%identityAlignment
AT1G12710.1 phloem protein 2-A121.8e-1050Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK
        E CVA+++ +LDP EICR + +NR FRG + AD +WE KLP +Y+ +++K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK

AT1G63090.1 phloem protein 2-A116.1e-1152Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK
        E CVAL+L +LDP EICR + +N  F G + ADF+WE KLP  Y+ +++K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK

AT3G53000.1 phloem protein 2-A151.1e-1263.27Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMD
        E CVA V M+L P EIC LAG+NR FRG AS+D +WE KLP +YQ L+D
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMD

AT3G61060.1 phloem protein 2-A131.5e-1260Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK
        E CVAL++  LDP EICRLA +NR+FR  +SADFIWE KLP++Y+ +  K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK

AT3G61060.2 phloem protein 2-A131.5e-1260Show/hide
Query:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK
        E CVAL++  LDP EICRLA +NR+FR  +SADFIWE KLP++Y+ +  K
Subjt:  EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGATTTGTGTGGCTCTGGTTCTGATGCATTTGGACCCGTCGGAGATTTGCAGATTGGCAGGAGTCAACCGGTTGTTTCGCGGCGTTGCGTCGGCGGATTTCATCTGGGA
ATTCAAATTGCCTTCGCACTATCAATTTCTGATGGACAAAGCATCGGAACTCGACGGAAAA
mRNA sequenceShow/hide mRNA sequence
GAGATTTGTGTGGCTCTGGTTCTGATGCATTTGGACCCGTCGGAGATTTGCAGATTGGCAGGAGTCAACCGGTTGTTTCGCGGCGTTGCGTCGGCGGATTTCATCTGGGA
ATTCAAATTGCCTTCGCACTATCAATTTCTGATGGACAAAGCATCGGAACTCGACGGAAAA
Protein sequenceShow/hide protein sequence
EICVALVLMHLDPSEICRLAGVNRLFRGVASADFIWEFKLPSHYQFLMDKASELDGK