CuGenDBv2

Gene ID	MS000199
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribosomal protein S19
Genome location	scaffold251:184477..184716
RNA-Seq Expression	MS000199
Synteny	MS000199
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR002222 - Ribosomal protein S19/S15 IPR020934 - Ribosomal protein S19 conserved site IPR023575 - Ribosomal protein S19/S15, superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_003587230.1 ribosomal protein S19 [Citrullus lanatus]

1.8e-34

98.7

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGR+GHKFGEFASTRKRRLSRTNIGPGKKG
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG

YP_003587264.1 ribosomal protein S19 [Citrullus lanatus]

3.4e-33

97.4

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKT VRCKITEGRVGHKFGEFA TRKRRLSRTNIGPGKKG
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG

YP_003587364.1 ribosomal protein S19 [Cucurbita pepo]

1.7e-32

97.37

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKT VRCKITEGRVGHKFGEFA TRKRRLSRTNIGPGKK
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK

YP_003587380.1 ribosomal protein S19 [Cucurbita pepo]

1.7e-32

97.37

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKT VRCKITEGRVGHKFGEFA TRKRRLSRTNIGPGKK
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK

YP_009913640.1 ribosomal protein S19 [Luffa acutangula]

1.4e-34

100

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG

TrEMBL top hits

e value

%identity

Alignment

A0A7D6C0E4 Ribosomal protein S19

6.6e-35

100

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG

D5I3A0 Ribosomal protein S19

8.7e-35

98.7

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGR+GHKFGEFASTRKRRLSRTNIGPGKKG
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG

D5I3D4 Ribosomal protein S19

1.6e-33

97.4

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKT VRCKITEGRVGHKFGEFA TRKRRLSRTNIGPGKKG
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG

D5I3F0 Ribosomal protein S19

8.1e-33

97.37

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKT VRCKITEGRVGHKFGEFA TRKRRLSRTNIGPGKK
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK

D5I3G6 Ribosomal protein S19

8.1e-33

97.37

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK
        FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKT VRCKITEGRVGHKFGEFA TRKRRLSRTNIGPGKK
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKK

SwissProt top hits

e value

%identity

Alignment

A5FZW1 30S ribosomal protein S19

2.7e-09

57.45

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Query:  KIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTR
        KIWSRRS+ILP+FV  +  +YNG+  +  ++TE  VGHKFGEF+ TR
Subjt:  KIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTR

P26874 Ribosomal protein S19, mitochondrial

7.6e-12

61.76

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Query:  KIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTR------KRRL-SRTNIGPGKK
        +IWSRRS ILP+FV    +IYNGK  V  KITE  VGHKFGEFASTR      KR L S+T I P KK
Subjt:  KIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTR------KRRL-SRTNIGPGKK

P27527 Ribosomal protein S19, mitochondrial

4.3e-31

86.08

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Query:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKGDK
        FLLRMKKKRD L NRKIWSRRSSILPEFVD  VRIYNGKT VRCKITEG+VGHKFGEFA TRKRR SRTNIGPG+K  K
Subjt:  FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKGDK

P39697 40S ribosomal protein S19, mitochondrial

4.0e-21

79.66

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Query:  MKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRK
        + KK++  LNRKIWSRRS+ILPE+VDS+VRIYNGKT VRCKITEG+VGHKFGEFA TRK
Subjt:  MKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRK

P46750 Ribosomal protein S19, mitochondrial

2.9e-11

56.6

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Query:  KIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSR
        KIWSRRS+ILP+FV  +V I+NG+  + CKI+   +GHKFGEFA TRK+ + +
Subjt:  KIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSR

Arabidopsis top hits

e value

%identity

Alignment

AT5G47320.1 ribosomal protein S19

2.9e-22

79.66

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Query:  MKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRK
        + KK++  LNRKIWSRRS+ILPE+VDS+VRIYNGKT VRCKITEG+VGHKFGEFA TRK
Subjt:  MKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRK

ATCG00820.1 ribosomal protein S19

1.2e-04

36.51

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Query:  LLRMKKKRDPLLNRKI---WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFAST
        LLR  +K +    ++I   WSR S+I+P  +  ++ I+NG+  +   I +  VGHK GEF+ T
Subjt:  LLRMKKKRDPLLNRKI---WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFAST

Sequences

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CDS sequence

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TTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCCTCGATTTTGCCGGAATTCGTTGATAGCTCCGTACGAATTTACAA
TGGAAAAACTTCTGTTCGTTGTAAGATCACTGAAGGAAGAGTTGGTCATAAATTTGGAGAGTTTGCTTCGACACGGAAACGAAGACTTTCGAGAACAAATATTGGACCGG
GAAAAAAGGGGGATAAAGTC

mRNA sequence

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Protein sequence

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FLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKGDKV

MS000199 (gene) of Bitter gourd (TR) v1 genome