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MS000234 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000234
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:52035..52337
RNA-Seq ExpressionMS000234
SyntenyMS000234
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576850.1 hypothetical protein SDJN03_24424, partial [Cucurbita argyrosperma subsp. sororia]5.4e-0441.24Show/hide
Query:  PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWMLF
        PSAV+  +LVALLLV  A+AH  H     HPPSS+                     PH      APPP  + +  +NS S+ WS+A+ MVA+SWMLF
Subjt:  PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWMLF

KAG7030901.1 Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.8e-0644.12Show/hide
Query:  TMA--PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWM
        TMA  PSAV++ +L  LLLV  A+ H  H     HPPSSE                           PTA PP G N+A+MNSFS+SWS+ + MVA SWM
Subjt:  TMA--PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWM

Query:  LF
        LF
Subjt:  LF

KGN53725.1 hypothetical protein Csa_014716 [Cucumis sativus]1.4e-0442.71Show/hide
Query:  PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWML
        PSAV++ +LVALLL+C A+AH  H    AHPPSSE            APPPQ                  H++A++NS S+ WS+A+ MVAASW++
Subjt:  PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWML

TrEMBL top hitse value%identityAlignment
A0A0A0KVS3 Uncharacterized protein6.9e-0542.71Show/hide
Query:  PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWML
        PSAV++ +LVALLL+C A+AH  H    AHPPSSE            APPPQ                  H++A++NS S+ WS+A+ MVAASW++
Subjt:  PSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTACAATGGCTCCCTCCGCCGTTGTGGCCTCCATGCTGGTGGCGCTGCTGCTGGTTTGCTCCGCTCATGCGCACGGCGATCACGGTTCCTCGCCCGCACACCCTCCATC
CTCTGAGGCTCCTCCTCCGAAGGGCGGTAGTAGTACTCCTGCAGCTCCTCCGCCGCAGCTGACCCAACCGCCCCACCCGGTCGAAGGCCCCACCGCTCCTCCTCCGACCG
GGCACAACTCCGCCGTGATGAACAGCTTTTCATTCTCTTGGTCTGTGGCTGTTGGCATGGTGGCTGCTTCTTGGATGTTGTTT
mRNA sequenceShow/hide mRNA sequence
AGTACAATGGCTCCCTCCGCCGTTGTGGCCTCCATGCTGGTGGCGCTGCTGCTGGTTTGCTCCGCTCATGCGCACGGCGATCACGGTTCCTCGCCCGCACACCCTCCATC
CTCTGAGGCTCCTCCTCCGAAGGGCGGTAGTAGTACTCCTGCAGCTCCTCCGCCGCAGCTGACCCAACCGCCCCACCCGGTCGAAGGCCCCACCGCTCCTCCTCCGACCG
GGCACAACTCCGCCGTGATGAACAGCTTTTCATTCTCTTGGTCTGTGGCTGTTGGCATGGTGGCTGCTTCTTGGATGTTGTTT
Protein sequenceShow/hide protein sequence
STMAPSAVVASMLVALLLVCSAHAHGDHGSSPAHPPSSEAPPPKGGSSTPAAPPPQLTQPPHPVEGPTAPPPTGHNSAVMNSFSFSWSVAVGMVAASWMLF