; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000239 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000239
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpolyadenylate-binding protein 2-like
Genome locationscaffold44:83394..87997
RNA-Seq ExpressionMS000239
SyntenyMS000239
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014873.1 Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]5.5e-10196.95Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHED+DMIG E+NDA ELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLE EAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNP+MGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

XP_008462875.1 PREDICTED: polyadenylate-binding protein 2-like isoform X2 [Cucumis melo]8.4e-10296.95Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+DIDMIGS++NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

XP_011653388.1 polyadenylate-binding protein 2 isoform X3 [Cucumis sativus]1.1e-10196.45Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+D+DMIGS++NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

XP_022140995.1 polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]6.9e-104100Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

XP_038877304.1 polyadenylate-binding protein 2-like [Benincasa hispida]1.1e-10196.45Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+D+DMIGS++NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ1 RRM domain-containing protein5.3e-10296.45Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+D+DMIGS++NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

A0A1S3CHX7 polyadenylate-binding protein 2-like isoform X24.1e-10296.95Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+DIDMIGS++NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

A0A1S3CIE7 polyadenylate-binding protein 2-like isoform X12.9e-10094.55Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+DIDMIGS++NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG-----KVPRFRMPTRYGP
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG     KVPRFRMPTRYGP
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG-----KVPRFRMPTRYGP

Query:  YY
        YY
Subjt:  YY

A0A5A7V2R3 Polyadenylate-binding protein 2-like isoform X24.1e-10296.95Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+DIDMIGS++NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

A0A6J1CGQ3 polyadenylate-binding protein 2-like isoform X13.3e-104100Show/hide
Query:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 22.1e-3452.76Show/hide
Query:  ELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEF
        EL +MK+R+ EME EAA LR MQ +++ E  ++++         ++E +DA+SV+VGNVDYS TPEE+Q HF SCG+VNR+TI  DKF G PKG+AY+EF
Subjt:  ELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEF

Query:  LEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-----RSNPFMGARSRSPYVAPY
         EP  V  ALLLN S LH R LKVT KRTN+PGM + R R     R     G R R+   APY
Subjt:  LEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-----RSNPFMGARSRSPYVAPY

Q93VI4 Polyadenylate-binding protein 13.6e-6367.91Show/hide
Query:  GSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK
        GS S D   L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPK
Subjt:  GSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK

Query:  GYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        G+AYVEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V   F+ PY YG+VPRFR P RY PY
Subjt:  GYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

Q9DDY9 Polyadenylate-binding protein 2-A7.3e-3242.31Show/hide
Query:  EHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAA---ASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        E E  ++ G ++ +  EL+ +K R++EME+EA  L+E+Q +VEK+M+    P +A     S   + E DARS++VGNVDY  T EE++ HF  CG+VNR+
Subjt:  EHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAA---ASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKF-GQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMK---------QYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFR
        TI  DKF G PKG+AY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+          +YR R S+      SRS + + Y   P G     R R
Subjt:  TIRTDKF-GQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMK---------QYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFR

Query:  MPTRYGPY
          + Y PY
Subjt:  MPTRYGPY

Q9FJN9 Polyadenylate-binding protein 25.7e-7775.52Show/hide
Query:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        D+DM  ++ +   ELD+MKKRLKEMEDEAAALREMQAKVEKEM + QDPAS AA+QA +EEVDARSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI TDK
Subjt:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PG+KQ+R RR NP+MG R R P+++PY +SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

Q9LX90 Polyadenylate-binding protein 33.7e-7674.48Show/hide
Query:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        DIDM  ++ +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVDARSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DK
Subjt:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-7774.48Show/hide
Query:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        DIDM  ++ +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVDARSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DK
Subjt:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.3e-7174.72Show/hide
Query:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        DIDM  ++ +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVDARSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DK
Subjt:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYG
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG

AT5G51120.1 polyadenylate-binding protein 12.6e-6467.91Show/hide
Query:  GSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK
        GS S D   L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPK
Subjt:  GSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK

Query:  GYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        G+AYVEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V   F+ PY YG+VPRFR P RY PY
Subjt:  GYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

AT5G51120.2 polyadenylate-binding protein 14.7e-5855.36Show/hide
Query:  GSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQ-------------------------------------DPASAAASQANREEVDARSVF
        GS S D   L+DMKKR+KE+E+EA ALREMQAK EK+M + Q                                     +  ++  S A +EEVD+RS++
Subjt:  GSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQ-------------------------------------DPASAAASQANREEVDARSVF

Query:  VGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA
        VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V 
Subjt:  VGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA

Query:  PYFFSPYGYGKVPRFRMPTRYGPY
          F+ PY YG+VPRFR P RY PY
Subjt:  PYFFSPYGYGKVPRFRMPTRYGPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-7875.52Show/hide
Query:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        D+DM  ++ +   ELD+MKKRLKEMEDEAAALREMQAKVEKEM + QDPAS AA+QA +EEVDARSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI TDK
Subjt:  DIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEF+E EAVQEAL LNESELHGRQLKV  KRTN+PG+KQ+R RR NP+MG R R P+++PY +SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACGAAGACATCGACATGATTGGCTCGGAGAGCAACGATGCCGTTGAGCTAGACGACATGAAGAAACGGTTGAAAGAGATGGAAGATGAAGCTGCTGCCCTACG
TGAGATGCAGGCCAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCAGCAAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTAG
GCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGAACTGTAAACAGAATCACCATTCGCACTGATAAGTTTGGGCAACCAAAGGGT
TATGCTTATGTTGAATTCCTTGAGCCCGAAGCTGTTCAAGAGGCTCTCCTTCTGAATGAGTCAGAACTACATGGTCGACAGCTGAAGGTAACTGCGAAGAGGACAAACAT
ACCTGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCATTTATGGGTGCTCGATCCAGGAGCCCATATGTCGCTCCTTATTTCTTCTCACCATATGGATACGGGAAAG
TCCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGCACGAAGACATCGACATGATTGGCTCGGAGAGCAACGATGCCGTTGAGCTAGACGACATGAAGAAACGGTTGAAAGAGATGGAAGATGAAGCTGCTGCCCTACG
TGAGATGCAGGCCAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCAGCAAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTAG
GCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGAACTGTAAACAGAATCACCATTCGCACTGATAAGTTTGGGCAACCAAAGGGT
TATGCTTATGTTGAATTCCTTGAGCCCGAAGCTGTTCAAGAGGCTCTCCTTCTGAATGAGTCAGAACTACATGGTCGACAGCTGAAGGTAACTGCGAAGAGGACAAACAT
ACCTGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCATTTATGGGTGCTCGATCCAGGAGCCCATATGTCGCTCCTTATTTCTTCTCACCATATGGATACGGGAAAG
TCCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTAT
Protein sequenceShow/hide protein sequence
MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKG
YAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY