; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000260 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000260
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolyadenylate-binding protein, putative
Genome locationscaffold44:397994..401867
RNA-Seq ExpressionMS000260
SyntenyMS000260
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453839.1 PREDICTED: polyadenylate-binding protein 1-like isoform X2 [Cucumis melo]9.6e-10794.95Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME N+NY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ FGFR 
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPF P AP YPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

XP_022141261.1 polyadenylate-binding protein 1-like isoform X1 [Momordica charantia]1.5e-115100Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

XP_022141262.1 polyadenylate-binding protein 1-like isoform X2 [Momordica charantia]1.1e-11399.54Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

XP_022941798.1 polyadenylate-binding protein 1-like isoform X1 [Cucurbita moschata]3.3e-10794.52Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGY-EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
        MEHNFNY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY +AEP+NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGY-EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE

Query:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFR
        EVD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ +GFR
Subjt:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFR

Query:  GGRRPFMPAAPFYPSYGYG
         GRRPFM  APFYPSYGYG
Subjt:  GGRRPFMPAAPFYPSYGYG

XP_038876136.1 polyadenylate-binding protein 1-like isoform X1 [Benincasa hispida]3.9e-10896.33Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME NFNY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ FGFR 
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAP YPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

TrEMBL top hitse value%identityAlignment
A0A1S3BYF0 polyadenylate-binding protein 1-like isoform X24.7e-10794.95Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        ME N+NY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY+AEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ FGFR 
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPF P AP YPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

A0A6J1CIL8 polyadenylate-binding protein 1-like isoform X17.2e-116100Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

A0A6J1CJE1 polyadenylate-binding protein 1-like isoform X25.1e-11499.54Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPFMPAAPFYPSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

A0A6J1FT42 polyadenylate-binding protein 1-like isoform X11.6e-10794.52Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGY-EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
        MEHNFNY+EHEHEVYGGDIPDD EMDADLDMSSGRADEEGY +AEP+NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGY-EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKE

Query:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFR
        EVD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRP+ +GFR
Subjt:  EVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFR

Query:  GGRRPFMPAAPFYPSYGYG
         GRRPFM  APFYPSYGYG
Subjt:  GGRRPFMPAAPFYPSYGYG

A0A6J1J6L4 polyadenylate-binding protein 1-like isoform X13.9e-10692.66Show/hide
Query:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
        M+ NFNY+EH+HEVYGGDIPDD EMDADLDMSSGRADEE Y+AEPS+ANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE
Subjt:  MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG
         DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALLLNESELHGRQLKVSAKRTNVPGMKQ+RGRRP+SFGFR 
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
        GRRPF+P+APF PSYGYG
Subjt:  GRRPFMPAAPFYPSYGYG

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 23.2e-3653.57Show/hide
Query:  NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKG
        +   K+L +MK R+ E+E EA  LR MQ +++ E          T A + +KE +D++SVYVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF GHPKG
Subjt:  NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKG

Query:  FAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK------QYRGRRPSSFGFRGGRRPFMP
        FAY+EF E   V NALLLN S LH R LKV+ KRTNVPGM       + RGR     G+RG  R F P
Subjt:  FAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMK------QYRGRRPSSFGFRGGRRPFMP

Q28ZX3 Polyadenylate-binding protein 22.4e-3147.85Show/hide
Query:  EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM-GAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF
        E E S     +LE +K R+KE+EEEA  +++MQ++V+K+M G      ++   +  EK+E+D+RSVYVGNVDY  + EE++ HF  CGT+NRVTIL +K 
Subjt:  EAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM-GAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF

Query:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR
         GHPKGFAY+EF   + V+ AL +NE+   GRQ+KV +KRTN PG+         SF  RG R
Subjt:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR

Q93VI4 Polyadenylate-binding protein 11.6e-7270.64Show/hide
Query:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        ++E EHEVYGG+IP++ E + D +       EEG      E EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
          R FMP  PFYP Y YG
Subjt:  GRRPFMPAAPFYPSYGYG

Q9FJN9 Polyadenylate-binding protein 25.9e-6766.82Show/hide
Query:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD
        EE EHEVYGG+IPD GEMD D+     D+    AD++           K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD
Subjt:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD

Query:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR
        +RSV+VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR + +     R
Subjt:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR

Query:  RPFMPAAPF-YPSYGYG
        RPFM  +P+ Y  YGYG
Subjt:  RPFMPAAPF-YPSYGYG

Q9LX90 Polyadenylate-binding protein 33.8e-6669.77Show/hide
Query:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        EE EHEVYGG+IP+ G+ D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY  GR   S G+R  RR
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR

Query:  PFMPAAPFYPSYGYG
        PF+P   FY  YGYG
Subjt:  PFMPAAPFYPSYGYG

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-6769.77Show/hide
Query:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        EE EHEVYGG+IP+ G+ D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY  GR   S G+R  RR
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR

Query:  PFMPAAPFYPSYGYG
        PF+P   FY  YGYG
Subjt:  PFMPAAPFYPSYGYG

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-6769.77Show/hide
Query:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR
        EE EHEVYGG+IP+ G+ D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+R
Subjt:  EEHEHEVYGGDIPDDGEMDA---DLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSR

Query:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR
        SVYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY  GR   S G+R  RR
Subjt:  SVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR-GRRPSSFGFRGGRR

Query:  PFMPAAPFYPSYGYG
        PF+P   FY  YGYG
Subjt:  PFMPAAPFYPSYGYG

AT5G51120.1 polyadenylate-binding protein 11.1e-7370.64Show/hide
Query:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV
        ++E EHEVYGG+IP++ E + D +       EEG      E EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEV
Subjt:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG
        DSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR 
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRG

Query:  GRRPFMPAAPFYPSYGYG
          R FMP  PFYP Y YG
Subjt:  GRRPFMPAAPFYPSYGYG

AT5G51120.2 polyadenylate-binding protein 12.5e-6859.45Show/hide
Query:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------
        ++E EHEVYGG+IP++ E + D +       EEG      E EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q                
Subjt:  YEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEG-----YEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------

Query:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE
                            ++  ++  + AEKEEVDSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNE
Subjt:  --------------------EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE

Query:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRGGRRPFMPAAPFYPSYGYG
        SELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR   R FMP  PFYP Y YG
Subjt:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPSSFGFRGGRRPFMPAAPFYPSYGYG

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-6866.82Show/hide
Query:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD
        EE EHEVYGG+IPD GEMD D+     D+    AD++           K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA  +D +S +A QA KEEVD
Subjt:  EEHEHEVYGGDIPDDGEMDADL-----DMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD

Query:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR
        +RSV+VGNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR + +     R
Subjt:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGR

Query:  RPFMPAAPF-YPSYGYG
        RPFM  +P+ Y  YGYG
Subjt:  RPFMPAAPF-YPSYGYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACAATTTTAACTACGAGGAGCACGAACACGAAGTCTATGGAGGCGATATTCCCGACGACGGAGAGATGGATGCCGACCTCGACATGTCCTCTGGTAGGGCCGA
CGAAGAGGGTTACGAGGCCGAGCCCAGTAACGCCAACTCCAAGGACTTGGAGGACATGAAAAGGAGGCTCAAGGAGATCGAGGAGGAAGCCGGTGCCCTTCGGGAAATGC
AGGCCAAGGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAAGTAGATTCCCGATCTGTATATGTTGGTAAT
GTTGATTATGCATGCACTCCTGAGGAGGTTCAACAACATTTTCAATCATGTGGAACAGTGAATAGAGTGACAATTTTGACAGACAAGTTCGGTCACCCTAAGGGATTTGC
TTATGTTGAGTTTGTGGAGGTTGATGCCGTACAGAATGCTTTGCTGTTGAATGAATCAGAGTTGCACGGTCGCCAACTAAAGGTCTCTGCCAAAAGGACAAATGTCCCTG
GAATGAAGCAATACCGAGGAAGGCGGCCCAGCTCTTTTGGCTTTCGAGGTGGTCGTCGGCCCTTCATGCCTGCTGCACCCTTTTATCCTTCATATGGTTATGGG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCACAATTTTAACTACGAGGAGCACGAACACGAAGTCTATGGAGGCGATATTCCCGACGACGGAGAGATGGATGCCGACCTCGACATGTCCTCTGGTAGGGCCGA
CGAAGAGGGTTACGAGGCCGAGCCCAGTAACGCCAACTCCAAGGACTTGGAGGACATGAAAAGGAGGCTCAAGGAGATCGAGGAGGAAGCCGGTGCCCTTCGGGAAATGC
AGGCCAAGGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACTCAGGCTGAAAAGGAGGAAGTAGATTCCCGATCTGTATATGTTGGTAAT
GTTGATTATGCATGCACTCCTGAGGAGGTTCAACAACATTTTCAATCATGTGGAACAGTGAATAGAGTGACAATTTTGACAGACAAGTTCGGTCACCCTAAGGGATTTGC
TTATGTTGAGTTTGTGGAGGTTGATGCCGTACAGAATGCTTTGCTGTTGAATGAATCAGAGTTGCACGGTCGCCAACTAAAGGTCTCTGCCAAAAGGACAAATGTCCCTG
GAATGAAGCAATACCGAGGAAGGCGGCCCAGCTCTTTTGGCTTTCGAGGTGGTCGTCGGCCCTTCATGCCTGCTGCACCCTTTTATCCTTCATATGGTTATGGG
Protein sequenceShow/hide protein sequence
MEHNFNYEEHEHEVYGGDIPDDGEMDADLDMSSGRADEEGYEAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGN
VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSSFGFRGGRRPFMPAAPFYPSYGYG