; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000273 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000273
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger CCCH domain-containing protein 54
Genome locationscaffold44:490409..491059
RNA-Seq ExpressionMS000273
SyntenyMS000273
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031490 - chromatin DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53171.2 hypothetical protein Csa_015342 [Cucumis sativus]1.6e-7765.16Show/hide
Query:  GFFPGINNAVFDHDFS-------GCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRG
        GF  GIN+ V+ H+FS           L E+ +D  AVF SDEFRM++YKIQRCPR RSHDWTECPYAHRGEKAQRRD R+FNY+AVACPAFR+G+CP+G
Subjt:  GFFPGINNAVFDHDFS-------GCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRG

Query:  DFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRN
        DFCE+AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH+PE+LR ETKQK  F+AH+ RV V A+E+P E KND +  I   + G        RKN+R+
Subjt:  DFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRN

Query:  FGWEVSDSDLPHIGWICELLQ
        FG +V++ +LPHI WI ELL+
Subjt:  FGWEVSDSDLPHIGWICELLQ

XP_008454474.1 PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo]6.9e-8166.96Show/hide
Query:  MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNC
        MFQGF  GIN+ V+ H+FS           L E+V+D  AVF +DEFRM++YKIQRCPR RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+C
Subjt:  MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNC

Query:  PRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKN
        P+GDFCE+AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V AVE+P E KND +  I     G        RKN
Subjt:  PRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKN

Query:  DRNFGWEVSDSDLPHIGWICELLQ
        +R+FG++VS+ +LPHI WI ELL+
Subjt:  DRNFGWEVSDSDLPHIGWICELLQ

XP_022141093.1 zinc finger CCCH domain-containing protein 54 isoform X1 [Momordica charantia]1.5e-12899.54Show/hide
Query:  MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE
        MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE
Subjt:  MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE

Query:  YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWE
        YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWE
Subjt:  YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWE

Query:  VSDSDLPHIGWICELLQ
        VSDSDLPHIGWI ELLQ
Subjt:  VSDSDLPHIGWICELLQ

XP_022141094.1 zinc finger CCCH domain-containing protein 54 isoform X2 [Momordica charantia]2.0e-11299.48Show/hide
Query:  MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGR
        MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGR
Subjt:  MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGR

Query:  FCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ
        FCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWI ELLQ
Subjt:  FCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ

XP_038878131.1 zinc finger CCCH domain-containing protein 54 [Benincasa hispida]1.4e-8169.27Show/hide
Query:  MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE
        MFQGF  GIN+ V+ H+FS     + +++D  A+F SDEFRM+AYKIQRCPR RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+CP+GDFCE
Subjt:  MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE

Query:  YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNI-VNGLKGLTVREIRERKNDRNFGW
        +AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH+P++LR ETKQKF+FNAHR RV V  VE+P E K D  S I V G  G        R+  R+FG 
Subjt:  YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNI-VNGLKGLTVREIRERKNDRNFGW

Query:  EVSDSDLPHIGWICELLQ
        EVS+ DLPH+ WI ELLQ
Subjt:  EVSDSDLPHIGWICELLQ

TrEMBL top hitse value%identityAlignment
A0A1S3BYP8 zinc finger CCCH domain-containing protein 543.3e-8166.96Show/hide
Query:  MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNC
        MFQGF  GIN+ V+ H+FS           L E+V+D  AVF +DEFRM++YKIQRCPR RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+C
Subjt:  MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNC

Query:  PRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKN
        P+GDFCE+AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V AVE+P E KND +  I     G        RKN
Subjt:  PRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKN

Query:  DRNFGWEVSDSDLPHIGWICELLQ
        +R+FG++VS+ +LPHI WI ELL+
Subjt:  DRNFGWEVSDSDLPHIGWICELLQ

A0A5A7TRB5 Zinc finger CCCH domain-containing protein 543.3e-8166.96Show/hide
Query:  MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNC
        MFQGF  GIN+ V+ H+FS           L E+V+D  AVF +DEFRM++YKIQRCPR RSHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR+G+C
Subjt:  MFQGFFPGINNAVFDHDFSGCH-------QLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNC

Query:  PRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKN
        P+GDFCE+AHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH+PE+LR ETK KF+ NA R RV V AVE+P E KND +  I     G        RKN
Subjt:  PRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKN

Query:  DRNFGWEVSDSDLPHIGWICELLQ
        +R+FG++VS+ +LPHI WI ELL+
Subjt:  DRNFGWEVSDSDLPHIGWICELLQ

A0A6J1CHL2 zinc finger CCCH domain-containing protein 54 isoform X29.6e-11399.48Show/hide
Query:  MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGR
        MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGR
Subjt:  MEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGR

Query:  FCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ
        FCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWI ELLQ
Subjt:  FCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ

A0A6J1CJI1 zinc finger CCCH domain-containing protein 54 isoform X17.3e-12999.54Show/hide
Query:  MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE
        MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE
Subjt:  MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCE

Query:  YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWE
        YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWE
Subjt:  YAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWE

Query:  VSDSDLPHIGWICELLQ
        VSDSDLPHIGWI ELLQ
Subjt:  VSDSDLPHIGWICELLQ

A0A6J1JDT4 zinc finger CCCH domain-containing protein 546.1e-7563Show/hide
Query:  MFQGFFPGINNAVFDHDFSGC---------HQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNG
        MFQGF  GIN+ V+ H+F+            +L  Q  D  A+F SDEFRM+A+KIQRCP++RSHDWTECPYAHRGEKAQRRD RRFNYSAVACPAFR G
Subjt:  MFQGFFPGINNAVFDHDFSGC---------HQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNG

Query:  NCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRE-
        +CP+GDFCE+AHGVFE+WLHP RYRTRACNAGRFCQRKVCFFAH+PE+LR ETK K HF A   R  + A++ P+E KND VS I        V+EI + 
Subjt:  NCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRE-

Query:  RKNDRNFGWEVSDSDLPHIGWICELLQ
          N+R+   E S+S+LPHI WI ELLQ
Subjt:  RKNDRNFGWEVSDSDLPHIGWICELLQ

SwissProt top hitse value%identityAlignment
O65036 Zinc finger CCCH domain-containing protein 543.2e-5756.72Show/hide
Query:  AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCF
        A++GSDEFRM+AYKI+RCPRTRSHDWTECPYAHRGEKA RRD RR+ Y AVACPAFRNG C RGD CE+AHGVFEYWLHPARYRTRACNAG  CQRKVCF
Subjt:  AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCF

Query:  FAHTPEQLR-SETKQKFHFNAHRTRV----------------PVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICEL
        FAH PEQLR SE K +  +     R                       +P+ S  DD+ +  N  K L     R    D ++     D DL H  WI EL
Subjt:  FAHTPEQLR-SETKQKFHFNAHRTRV----------------PVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICEL

Query:  L
        +
Subjt:  L

O82307 Zinc finger CCCH domain-containing protein 231.7e-4267.29Show/hide
Query:  FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFA
        F SDEFR++ +KI+RC R RSHDWTECP+AH GEKA+RRD R+F+YS  ACP FR G+C RGD CE++HGVFE WLHP+RYRT+ C  G  C+R++CFFA
Subjt:  FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFA

Query:  HTPEQLR
        HT EQLR
Subjt:  HTPEQLR

Q6L4N4 Zinc finger CCCH domain-containing protein 355.4e-4464.75Show/hide
Query:  EQVEDAAAV------FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRA
        E  E+AAAV      +  DEFRM+ +K++RC R RSHDWTECP+AH GEKA+RRD RR+ YS  ACP FR G C RGD CE+AHGVFE WLHPARYRT+ 
Subjt:  EQVEDAAAV------FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRA

Query:  CNAGRFCQRKVCFFAHTPEQLR
        C  G  C+R+VCFFAHTP+QLR
Subjt:  CNAGRFCQRKVCFFAHTPEQLR

Q9FU27 Zinc finger CCCH domain-containing protein 24.1e-4463.71Show/hide
Query:  GCHQLMEQVEDAAAV--FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRT
        G  +  E    AAAV  +  DEFRM+ +K++RC R RSHDWTECP+AH GEKA+RRD R+++YS  ACP FR G C RGD CEYAHGVFE WLHPARYRT
Subjt:  GCHQLMEQVEDAAAV--FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRT

Query:  RACNAGRFCQRKVCFFAHTPEQLR
        + C  G  C+R+VCFFAHTP+QLR
Subjt:  RACNAGRFCQRKVCFFAHTPEQLR

Q9ZWA1 Zinc finger CCCH domain-containing protein 23.9e-4266.37Show/hide
Query:  DAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAF-RNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQR
        D+   + SD FRMF +KI+RC R+RSHDWT+CP+AH GEKA+RRD RRF YS   CP F R G+C RGD CE+AHGVFE WLHP RYRT AC  G+ C+R
Subjt:  DAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAF-RNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQR

Query:  KVCFFAHTPEQLR
        KVCFFAH+P QLR
Subjt:  KVCFFAHTPEQLR

Arabidopsis top hitse value%identityAlignment
AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.7e-4366.37Show/hide
Query:  DAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAF-RNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQR
        D+   + SD FRMF +KI+RC R+RSHDWT+CP+AH GEKA+RRD RRF YS   CP F R G+C RGD CE+AHGVFE WLHP RYRT AC  G+ C+R
Subjt:  DAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAF-RNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQR

Query:  KVCFFAHTPEQLR
        KVCFFAH+P QLR
Subjt:  KVCFFAHTPEQLR

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.2e-4367.29Show/hide
Query:  FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFA
        F SDEFR++ +KI+RC R RSHDWTECP+AH GEKA+RRD R+F+YS  ACP FR G+C RGD CE++HGVFE WLHP+RYRT+ C  G  C+R++CFFA
Subjt:  FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFA

Query:  HTPEQLR
        HT EQLR
Subjt:  HTPEQLR

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein1.2e-4367.29Show/hide
Query:  FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFA
        F SDEFR++ +KI+RC R RSHDWTECP+AH GEKA+RRD R+F+YS  ACP FR G+C RGD CE++HGVFE WLHP+RYRT+ C  G  C+R++CFFA
Subjt:  FGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFA

Query:  HTPEQLR
        HT EQLR
Subjt:  HTPEQLR

AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain8.0e-4364.22Show/hide
Query:  AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCF
        +++ +DEFRM+++K++ C R  SHDWTECP+ H GE A+RRD R+F+YS V CP FR G C RGD CEYAHGVFE WLHPA+YRTR C  G  C R+VCF
Subjt:  AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCF

Query:  FAHTPEQLR
        FAHTPE+LR
Subjt:  FAHTPEQLR

AT5G07500.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.3e-5856.72Show/hide
Query:  AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCF
        A++GSDEFRM+AYKI+RCPRTRSHDWTECPYAHRGEKA RRD RR+ Y AVACPAFRNG C RGD CE+AHGVFEYWLHPARYRTRACNAG  CQRKVCF
Subjt:  AVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWLHPARYRTRACNAGRFCQRKVCF

Query:  FAHTPEQLR-SETKQKFHFNAHRTRV----------------PVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICEL
        FAH PEQLR SE K +  +     R                       +P+ S  DD+ +  N  K L     R    D ++     D DL H  WI EL
Subjt:  FAHTPEQLR-SETKQKFHFNAHRTRV----------------PVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICEL

Query:  L
        +
Subjt:  L


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAAGGGTTTTTTCCCGGCATAAATAATGCCGTTTTCGACCATGATTTTTCCGGCTGCCACCAGCTGATGGAGCAAGTGGAAGACGCGGCGGCGGTGTTCGGCTC
CGACGAGTTTCGGATGTTCGCGTACAAGATCCAACGGTGTCCGAGGACGCGCAGCCACGACTGGACCGAGTGTCCGTACGCCCACCGCGGCGAGAAGGCTCAACGCCGCG
ACCTACGGCGGTTCAACTACTCCGCCGTGGCCTGCCCGGCGTTCCGTAACGGCAACTGCCCGAGAGGTGACTTCTGCGAGTATGCTCACGGTGTGTTCGAGTACTGGCTC
CACCCGGCCCGGTACCGGACCCGCGCTTGCAATGCCGGCCGGTTTTGCCAACGGAAAGTTTGTTTCTTTGCACACACGCCGGAGCAGCTCCGGTCAGAGACGAAACAAAA
GTTTCATTTCAATGCTCACCGAACACGTGTGCCGGTGGTTGCCGTTGAAGCTCCGTTGGAGAGTAAGAACGACGACGTTTCGAATATTGTGAACGGTCTGAAAGGGCTTA
CGGTGAGAGAGATCAGAGAACGGAAAAATGACCGAAACTTCGGGTGGGAGGTATCGGATTCCGATCTGCCGCATATCGGTTGGATATGCGAGCTGTTACAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCAAGGGTTTTTTCCCGGCATAAATAATGCCGTTTTCGACCATGATTTTTCCGGCTGCCACCAGCTGATGGAGCAAGTGGAAGACGCGGCGGCGGTGTTCGGCTC
CGACGAGTTTCGGATGTTCGCGTACAAGATCCAACGGTGTCCGAGGACGCGCAGCCACGACTGGACCGAGTGTCCGTACGCCCACCGCGGCGAGAAGGCTCAACGCCGCG
ACCTACGGCGGTTCAACTACTCCGCCGTGGCCTGCCCGGCGTTCCGTAACGGCAACTGCCCGAGAGGTGACTTCTGCGAGTATGCTCACGGTGTGTTCGAGTACTGGCTC
CACCCGGCCCGGTACCGGACCCGCGCTTGCAATGCCGGCCGGTTTTGCCAACGGAAAGTTTGTTTCTTTGCACACACGCCGGAGCAGCTCCGGTCAGAGACGAAACAAAA
GTTTCATTTCAATGCTCACCGAACACGTGTGCCGGTGGTTGCCGTTGAAGCTCCGTTGGAGAGTAAGAACGACGACGTTTCGAATATTGTGAACGGTCTGAAAGGGCTTA
CGGTGAGAGAGATCAGAGAACGGAAAAATGACCGAAACTTCGGGTGGGAGGTATCGGATTCCGATCTGCCGCATATCGGTTGGATATGCGAGCTGTTACAG
Protein sequenceShow/hide protein sequence
MFQGFFPGINNAVFDHDFSGCHQLMEQVEDAAAVFGSDEFRMFAYKIQRCPRTRSHDWTECPYAHRGEKAQRRDLRRFNYSAVACPAFRNGNCPRGDFCEYAHGVFEYWL
HPARYRTRACNAGRFCQRKVCFFAHTPEQLRSETKQKFHFNAHRTRVPVVAVEAPLESKNDDVSNIVNGLKGLTVREIRERKNDRNFGWEVSDSDLPHIGWICELLQ