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MS000303 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000303
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:762950..763390
RNA-Seq ExpressionMS000303
SyntenyMS000303
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1457.5Show/hide
Query:  MASKRVSVMWAVVFFFIMLLMASNVAARKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFLSSHS-NDDPRGGNY
        MAS  VSV W  VFF  MLLMASNV++RK  D NIP+ DG +++  AS   Y+LE E EK +E F+ SH+ ND PRGGNY
Subjt:  MASKRVSVMWAVVFFFIMLLMASNVAARKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFLSSHS-NDDPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]1.9e-1255.95Show/hide
Query:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY
        MASKRVS++  VVFF IMLL++S    NV+ARKF D N PL D  +LQ DAS L YK++ E ++ +ED L ++  ND PRGGNY
Subjt:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]6.8e-1054.12Show/hide
Query:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIP-LGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY
        MAS RVS++  V+FF IML ++S    N +ARKF D N P L D  DLQ  AS L YKLE E +K +ED L ++  ND PRGGNY
Subjt:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIP-LGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]1.5e-0450.94Show/hide
Query:  RKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY
        +KF D N PL D  +LQ DAS L YK++ E ++ +ED L ++  ND PRGGNY
Subjt:  RKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein3.3e-1054.12Show/hide
Query:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIP-LGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY
        MAS RVS++  V+FF IML ++S    N +ARKF D N P L D  DLQ  AS L YKLE E +K +ED L ++  ND PRGGNY
Subjt:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIP-LGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY

A0A0A0KW84 Uncharacterized protein9.2e-1355.95Show/hide
Query:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY
        MASKRVS++  VVFF IMLL++S    NV+ARKF D N PL D  +LQ DAS L YK++ E ++ +ED L ++  ND PRGGNY
Subjt:  MASKRVSVMWAVVFFFIMLLMAS----NVAARKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFL-SSHSNDDPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGAGAGTTTCAGTGATGTGGGCTGTGGTGTTTTTCTTTATTATGCTTTTAATGGCTTCTAATGTTGCTGCTAGGAAATTTCCTGATACTAATATCCCTCT
TGGAGATGGCTTGGACCTTCAATTTGATGCATCACCTTTGCTCTACAAATTGGAACTGGAGGCGGAAAAGACATATGAGGATTTTCTAAGCTCGCACAGTAATGATGATC
CTCGTGGTGGAAACTAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGAGAGTTTCAGTGATGTGGGCTGTGGTGTTTTTCTTTATTATGCTTTTAATGGCTTCTAATGTTGCTGCTAGGAAATTTCCTGATACTAATATCCCTCT
TGGAGATGGCTTGGACCTTCAATTTGATGCATCACCTTTGCTCTACAAATTGGAACTGGAGGCGGAAAAGACATATGAGGATTTTCTAAGCTCGCACAGTAATGATGATC
CTCGTGGTGGAAACTAC
Protein sequenceShow/hide protein sequence
MASKRVSVMWAVVFFFIMLLMASNVAARKFPDTNIPLGDGLDLQFDASPLLYKLELEAEKTYEDFLSSHSNDDPRGGNY