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MS000306 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000306
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:774042..774597
RNA-Seq ExpressionMS000306
SyntenyMS000306
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1555Show/hide
Query:  MASKRVSVIWAVVFLFIMLLMASNVAARKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY
        MAS  VSV W  VF   MLLMASNV++RK  D +IP+ DG NV+  AS   Y+ E E+EK ++ F++SH  ND PRGGNY
Subjt:  MASKRVSVIWAVVFLFIMLLMASNVAARKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]2.3e-1353.57Show/hide
Query:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY
        MASKRVS+I  VVF  IMLL++S    NV+ARKF D + PL D  N+Q DAS L YK + E+++ ++D L++   ND PRGGNY
Subjt:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]2.0e-0948.24Show/hide
Query:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIP-LGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY
        MAS RVS+I  V+F  IML ++S    N +ARKF D + P L D  ++Q  AS L YK E E++K ++D L++   ND PRGGNY
Subjt:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIP-LGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]6.0e-0647.17Show/hide
Query:  RKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY
        +KF D + PL D  N+Q DAS L YK + E+++ ++D L++   ND PRGGNY
Subjt:  RKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein9.6e-1048.24Show/hide
Query:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIP-LGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY
        MAS RVS+I  V+F  IML ++S    N +ARKF D + P L D  ++Q  AS L YK E E++K ++D L++   ND PRGGNY
Subjt:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIP-LGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY

A0A0A0KW84 Uncharacterized protein1.1e-1353.57Show/hide
Query:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY
        MASKRVS+I  VVF  IMLL++S    NV+ARKF D + PL D  N+Q DAS L YK + E+++ ++D L++   ND PRGGNY
Subjt:  MASKRVSVIWAVVFLFIMLLMAS----NVAARKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGAGAGTTTCAGTGATCTGGGCTGTGGTGTTTCTCTTTATTATGCTCTTAATGGCTTCTAATGTTGCTGCTAGGAAATTTCCTGATACTCATATCCCTCT
TGGGGATGGCTTGAACGTTCAATTTGATGCATCTCCTTTGCTATACAAATTTGAAGTGGAGATGGAAAAGACATATCAGGATTTTCTAAGATCGCACATTAGTAATGATG
ATCCTCGAGGTGGAAACTAC
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGAGAGTTTCAGTGATCTGGGCTGTGGTGTTTCTCTTTATTATGCTCTTAATGGCTTCTAATGTTGCTGCTAGGAAATTTCCTGATACTCATATCCCTCT
TGGGGATGGCTTGAACGTTCAATTTGATGCATCTCCTTTGCTATACAAATTTGAAGTGGAGATGGAAAAGACATATCAGGATTTTCTAAGATCGCACATTAGTAATGATG
ATCCTCGAGGTGGAAACTAC
Protein sequenceShow/hide protein sequence
MASKRVSVIWAVVFLFIMLLMASNVAARKFPDTHIPLGDGLNVQFDASPLLYKFEVEMEKTYQDFLRSHISNDDPRGGNY