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MS000308 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000308
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAconitate hydratase
Genome locationscaffold44:785220..785633
RNA-Seq ExpressionMS000308
SyntenyMS000308
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044639.1 Aconitate hydratase [Cucumis melo var. makuwa]2.4e-0553.85Show/hide
Query:  IATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP
        +AT R I ++   GD  + ++M  KN  G +   L+S+A PRGGNYINNP AAEKAAVR S YQP
Subjt:  IATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP

KAG6600180.1 hypothetical protein SDJN03_05413, partial [Cucurbita argyrosperma subsp. sororia]6.5e-1152.94Show/hide
Query:  MGLKRESIFFSVMLLLLLHIATARFIQ-TSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP
        MGLKR  I  SVM+L+L+H+AT R ++ T+LP  D  + ++M  +   G Q   L+SSARPRGGNYI+NPQAA KAA++ S Y P
Subjt:  MGLKRESIFFSVMLLLLLHIATARFIQ-TSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP

KGN53132.1 hypothetical protein Csa_014795 [Cucumis sativus]9.4e-1056.47Show/hide
Query:  MGLKRESIFFSVMLLLLL-HIATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP
        MGLKRESIFFSVMLLLLL ++AT R +  S       + ++M  KN  G +    +SSA PRGGNYIN P AAEKAAV  + YQP
Subjt:  MGLKRESIFFSVMLLLLL-HIATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP

TrEMBL top hitse value%identityAlignment
A0A0A0KXI8 Aconitate hydratase4.5e-1056.47Show/hide
Query:  MGLKRESIFFSVMLLLLL-HIATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP
        MGLKRESIFFSVMLLLLL ++AT R +  S       + ++M  KN  G +    +SSA PRGGNYIN P AAEKAAV  + YQP
Subjt:  MGLKRESIFFSVMLLLLL-HIATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP

A0A5A7TTS9 Aconitate hydratase1.2e-0553.85Show/hide
Query:  IATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP
        +AT R I ++   GD  + ++M  KN  G +   L+S+A PRGGNYINNP AAEKAAVR S YQP
Subjt:  IATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTAAAGAGAGAATCGATCTTTTTCAGTGTCATGCTCCTCCTCCTTCTCCATATTGCAACTGCGAGATTCATCCAAACTTCTTTACCTTGCGGAGATCTCAAGAA
GAAGATCGATATGGGTAGGAAGAACATGGTGGGACTGCAGAATCGGCTTCTGATTAGCTCGGCTCGGCCAAGAGGAGGCAACTATATTAACAACCCACAGGCAGCGGAGA
AGGCCGCGGTGCGAGCCTCCGTCTACCAGCCA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTAAAGAGAGAATCGATCTTTTTCAGTGTCATGCTCCTCCTCCTTCTCCATATTGCAACTGCGAGATTCATCCAAACTTCTTTACCTTGCGGAGATCTCAAGAA
GAAGATCGATATGGGTAGGAAGAACATGGTGGGACTGCAGAATCGGCTTCTGATTAGCTCGGCTCGGCCAAGAGGAGGCAACTATATTAACAACCCACAGGCAGCGGAGA
AGGCCGCGGTGCGAGCCTCCGTCTACCAGCCA
Protein sequenceShow/hide protein sequence
MGLKRESIFFSVMLLLLLHIATARFIQTSLPCGDLKKKIDMGRKNMVGLQNRLLISSARPRGGNYINNPQAAEKAAVRASVYQP