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MS000311 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000311
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:819919..820501
RNA-Seq ExpressionMS000311
SyntenyMS000311
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]1.3e-0748.24Show/hide
Query:  MASTTRVLFVLIKLLFFAFLLIASS--VSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP
        MAS+   + +++KLLFFA LL  +S  VSAT+N P  HK   RK+ +          V KV +P +DDVPWGGGYV  PPIL++P
Subjt:  MASTTRVLFVLIKLLFFAFLLIASS--VSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP

KAE8650426.1 hypothetical protein Csa_009889 [Cucumis sativus]3.0e-0750Show/hide
Query:  MASTTRVLFVLIKLLFFAFLLIASSVSATSNT--PFHHKSRTRKLFI-PMTN------VAKVKKPFADDVPWGGGYVPPILSNP
        MAS  R+  +L+KLLFF+ LLI S+VS T+N   P  HK R RK+ +   TN      V +V KP ++D PWGGGY+ P LSNP
Subjt:  MASTTRVLFVLIKLLFFAFLLIASSVSATSNT--PFHHKSRTRKLFI-PMTN------VAKVKKPFADDVPWGGGYVPPILSNP

KAE8650427.1 hypothetical protein Csa_010020 [Cucumis sativus]1.9e-0645.88Show/hide
Query:  MASTTRVLFVLIKLLFFAFLLIA--SSVSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP
        MAS+   + +++KLLFFA LL    +++SAT+N P  HK   RK+ +          V KV KP + D PWGGGYV  PPIL+NP
Subjt:  MASTTRVLFVLIKLLFFAFLLIA--SSVSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP

KAG6576805.1 hypothetical protein SDJN03_24379, partial [Cucurbita argyrosperma subsp. sororia]6.9e-0468.42Show/hide
Query:  RTRKLFIPMTNVAK--VKKPFADDVPWGGGYVPPILSN
        RTRK+ +    V K   KKP ADDVPWGGGYVPPILSN
Subjt:  RTRKLFIPMTNVAK--VKKPFADDVPWGGGYVPPILSN

KAG7014832.1 hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-1054.55Show/hide
Query:  MASTTRV-LFVLIKLLFFAFLLIASSVSATSNTPFHHKSRTRKLFIPMTNVAK--VKKPFADDVPWGGGYVPPILSN
        MAS  R+ + +L++LLFFA LL+AS+ SA ++    H  RT K+ +    V K   KKP ADDVPWGGGYVPPILSN
Subjt:  MASTTRV-LFVLIKLLFFAFLLIASSVSATSNTPFHHKSRTRKLFIPMTNVAK--VKKPFADDVPWGGGYVPPILSN

TrEMBL top hitse value%identityAlignment
A0A0A0L653 Uncharacterized protein1.4e-0750Show/hide
Query:  MASTTRVLFVLIKLLFFAFLLIASSVSATSNT--PFHHKSRTRKLFI-PMTN------VAKVKKPFADDVPWGGGYVPPILSNP
        MAS  R+  +L+KLLFF+ LLI S+VS T+N   P  HK R RK+ +   TN      V +V KP ++D PWGGGY+ P LSNP
Subjt:  MASTTRVLFVLIKLLFFAFLLIASSVSATSNT--PFHHKSRTRKLFI-PMTN------VAKVKKPFADDVPWGGGYVPPILSNP

A0A0A0L8B2 Uncharacterized protein9.4e-0745.88Show/hide
Query:  MASTTRVLFVLIKLLFFAFLLIA--SSVSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP
        MAS+   + +++KLLFFA LL    +++SAT+N P  HK   RK+ +          V KV KP + D PWGGGYV  PPIL+NP
Subjt:  MASTTRVLFVLIKLLFFAFLLIA--SSVSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP

A0A5D3DJ60 Uncharacterized protein6.5e-0848.24Show/hide
Query:  MASTTRVLFVLIKLLFFAFLLIASS--VSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP
        MAS+   + +++KLLFFA LL  +S  VSAT+N P  HK   RK+ +          V KV +P +DDVPWGGGYV  PPIL++P
Subjt:  MASTTRVLFVLIKLLFFAFLLIASS--VSATSNTPFHHKSRTRKLFIPMTN------VAKVKKPFADDVPWGGGYV--PPILSNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCACCACTAGAGTTTTGTTTGTGTTGATCAAGCTACTTTTCTTTGCTTTTCTTCTCATTGCCTCTTCTGTTTCTGCAACAAGCAACACTCCTTTTCACCACAA
ATCGCGCACTCGTAAGTTGTTCATTCCGATGACGAACGTAGCAAAAGTAAAGAAACCATTTGCTGATGATGTCCCATGGGGTGGAGGCTATGTCCCTCCAATATTAAGCA
ACCCT
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCACCACTAGAGTTTTGTTTGTGTTGATCAAGCTACTTTTCTTTGCTTTTCTTCTCATTGCCTCTTCTGTTTCTGCAACAAGCAACACTCCTTTTCACCACAA
ATCGCGCACTCGTAAGTTGTTCATTCCGATGACGAACGTAGCAAAAGTAAAGAAACCATTTGCTGATGATGTCCCATGGGGTGGAGGCTATGTCCCTCCAATATTAAGCA
ACCCT
Protein sequenceShow/hide protein sequence
MASTTRVLFVLIKLLFFAFLLIASSVSATSNTPFHHKSRTRKLFIPMTNVAKVKKPFADDVPWGGGYVPPILSNP