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MS000313 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000313
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:836198..836494
RNA-Seq ExpressionMS000313
SyntenyMS000313
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067665.1 hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa]5.3e-2059.18Show/hide
Query:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK
        MAR ILP EFGGGG        GGES            GD+FFG+DDMKE+ WDGV+TEETVRF+E ESA KALRK+S+R+L+ F+CFEFL++V  FK
Subjt:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK

KAG6576802.1 hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2467.35Show/hide
Query:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYD-VGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCF
        MAR  LP EFG GG        GG+SCS+    SKYD VGDIFFG+DDMK +VWD VFTEETVRFLE ESA++ LRK+SKRRL+TF CFEFLK +WCF
Subjt:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYD-VGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCF

KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1062.69Show/hide
Query:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYD-VGDIFFGRDDMKEFVWDGVFTEETVRFLE
        MA    P EFGG G   DGG   G+SCS   + SKYD VGDIFFG+DDMKE+ WDG FTE+TVRF+E
Subjt:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYD-VGDIFFGRDDMKEFVWDGVFTEETVRFLE

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-1062.69Show/hide
Query:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYD-VGDIFFGRDDMKEFVWDGVFTEETVRFLE
        MA    P EFGG G   DGG   G+SCS   + SKYD VGDIFFG+DDMKE+ WDG FTE+TVRF+E
Subjt:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYD-VGDIFFGRDDMKEFVWDGVFTEETVRFLE

KGN57263.1 hypothetical protein Csa_009618 [Cucumis sativus]1.5e-2261.62Show/hide
Query:  MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK
        MAR ILP EFGGGG G S+ G                  GDIFFG+DDMKE+ WDGV+TEETVRF+E ESA KALRK+S+R+L+ F+CFEFLK+VWCFK
Subjt:  MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK

TrEMBL top hitse value%identityAlignment
A0A061FZA7 Uncharacterized protein9.8e-0438.6Show/hide
Query:  MARGILPCEFGGGGGSSDGGLHGGE----SC--SASNKKSKYD-----------VGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRR-L
        MARGI P   G G     GG  G +     C  SAS+   + D           VGD+FFG DD+++   D ++ E+ +    RE+A+K+LR++SK+R +
Subjt:  MARGILPCEFGGGGGSSDGGLHGGE----SC--SASNKKSKYD-----------VGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRR-L

Query:  QTFDCFEFLKLVWC
         TF C EFLKL+ C
Subjt:  QTFDCFEFLKLVWC

A0A0A0L658 Uncharacterized protein7.2e-2361.62Show/hide
Query:  MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK
        MAR ILP EFGGGG G S+ G                  GDIFFG+DDMKE+ WDGV+TEETVRF+E ESA KALRK+S+R+L+ F+CFEFLK+VWCFK
Subjt:  MARGILPCEFGGGG-GSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK

A0A5D2BXI7 Uncharacterized protein2.0e-0436.04Show/hide
Query:  MARGILPCEFGG------GGGSSDGGLHGGESCSASNKKS----------KYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRR-LQ
        MARGI   + GG      GGG   GG +  +S S S   S          +  +GD+FFG DD+++   D ++ E+ +   ++E+A K LR++SK+R + 
Subjt:  MARGILPCEFGG------GGGSSDGGLHGGESCSASNKKS----------KYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRR-LQ

Query:  TFDCFEFLKLV
         F C EFLKL+
Subjt:  TFDCFEFLKLV

A0A5D3DK72 Uncharacterized protein2.6e-2059.18Show/hide
Query:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK
        MAR ILP EFGGGG        GGES            GD+FFG+DDMKE+ WDGV+TEETVRF+E ESA KALRK+S+R+L+ F+CFEFL++V  FK
Subjt:  MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFK

A0A7J7DBE1 Uncharacterized protein6.1e-0636.19Show/hide
Query:  MARGILPCE-----FGGGGGSSDGGLHGGESCSASNKKS--KYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKL
        MARG+  C+       GG  SS   L    S    + KS   YDVGD+FFG DD+ +   D ++ E+ +    R+ A+K ++++ KR     +CFEFLKL
Subjt:  MARGILPCE-----FGGGGGSSDGGLHGGESCSASNKKS--KYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKL

Query:  VWCFK
        + C +
Subjt:  VWCFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGA
CGTCGGAGACATTTTCTTCGGTAGGGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGTTCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTC
TGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGA
CGTCGGAGACATTTTCTTCGGTAGGGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGTTCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTC
TGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA
Protein sequenceShow/hide protein sequence
MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFKL