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MS000356 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000356
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:1105797..1106195
RNA-Seq ExpressionMS000356
SyntenyMS000356
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57313.1 hypothetical protein Csa_010772 [Cucumis sativus]4.0e-1557Show/hide
Query:  CGIWLRRKLVVVFSSQKNYIIFPFRPIFFPLPHFSSSSSRKTKERLSGNSYSTGS-TSCPTRLSPTIISCCEDTCAPKVEAQLARATQVDQSQTSTPGLS
        CGI LRRK V VF     +     R             + + KE+LSGNS STGS T CPTRL PT ISCCEDTCA KVEA LAR   VDQS+TSTPGLS
Subjt:  CGIWLRRKLVVVFSSQKNYIIFPFRPIFFPLPHFSSSSSRKTKERLSGNSYSTGS-TSCPTRLSPTIISCCEDTCAPKVEAQLARATQVDQSQTSTPGLS
TrEMBL top hitse value%identityAlignment
A0A0A0L6B1 Uncharacterized protein1.9e-1557Show/hide
Query:  CGIWLRRKLVVVFSSQKNYIIFPFRPIFFPLPHFSSSSSRKTKERLSGNSYSTGS-TSCPTRLSPTIISCCEDTCAPKVEAQLARATQVDQSQTSTPGLS
        CGI LRRK V VF     +     R             + + KE+LSGNS STGS T CPTRL PT ISCCEDTCA KVEA LAR   VDQS+TSTPGLS
Subjt:  CGIWLRRKLVVVFSSQKNYIIFPFRPIFFPLPHFSSSSSRKTKERLSGNSYSTGS-TSCPTRLSPTIISCCEDTCAPKVEAQLARATQVDQSQTSTPGLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCGGTGCGGAATTTGGCTCAGAAGGAAACTCGTCGTCGTTTTCTCGTCTCAGAAAAATTATATTATTTTCCCTTTCCGACCCATTTTCTTTCCCCTCCCCCACTTCTC
CTCCTCGTCTAGCAGAAAAACAAAGGAGAGGCTCTCGGGCAACTCTTATTCCACGGGCAGCACAAGCTGCCCCACCCGTCTATCTCCGACCATCATTTCATGCTGTGAGG
ACACGTGTGCTCCAAAAGTGGAGGCCCAGCTCGCCAGGGCGACACAAGTGGATCAATCACAAACTTCCACGCCAGGCTTGTCA
mRNA sequenceShow/hide mRNA sequence
GTGCGGTGCGGAATTTGGCTCAGAAGGAAACTCGTCGTCGTTTTCTCGTCTCAGAAAAATTATATTATTTTCCCTTTCCGACCCATTTTCTTTCCCCTCCCCCACTTCTC
CTCCTCGTCTAGCAGAAAAACAAAGGAGAGGCTCTCGGGCAACTCTTATTCCACGGGCAGCACAAGCTGCCCCACCCGTCTATCTCCGACCATCATTTCATGCTGTGAGG
ACACGTGTGCTCCAAAAGTGGAGGCCCAGCTCGCCAGGGCGACACAAGTGGATCAATCACAAACTTCCACGCCAGGCTTGTCA
Protein sequenceShow/hide protein sequence
VRCGIWLRRKLVVVFSSQKNYIIFPFRPIFFPLPHFSSSSSRKTKERLSGNSYSTGSTSCPTRLSPTIISCCEDTCAPKVEAQLARATQVDQSQTSTPGLS