; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000379 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000379
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOB domain-containing protein
Genome locationscaffold44:1297412..1298117
RNA-Seq ExpressionMS000379
SyntenyMS000379
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-6286.52Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFA VH IYGASNVAKFL QLP+HLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIAFL+SN+QEA+ + +   +PIQGP +IGFSQIGLST
Subjt:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]5.6e-6185.11Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF  VH IYGASNVAKFL QLP HLRAEAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIA ++SNVQE     +   EPIQGP S+GFSQIGLST
Subjt:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST

XP_022923144.1 LOB domain-containing protein 24-like [Cucurbita moschata]5.1e-6286.52Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRFA VH IYGASNVAKFL QLP+HLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIAFL+SN+QEA+P  +   +PIQGP +IGFSQIGLST
Subjt:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]3.5e-6389.44Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFA VH IYGASNVAKFL QLP+HLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNV-QEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIAFL+SN+ QEA+P    V EPIQGP +IGFSQIGLST
Subjt:  TRAEIAFLSSNV-QEARPMPNTVTEPIQGPISIGFSQIGLST

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]9.3e-6488.65Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFA VH IYGASNVAKFL QLP+HLR EAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIAFL+SN+QEA+P    V +PIQGP +IGFSQIGLST
Subjt:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein2.7e-6185.11Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF  VH IYGASNVAKFL QLP HLRAEAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIA ++SNVQE     +   EPIQGP S+GFSQIGLST
Subjt:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST

A0A0A0LLX6 LOB domain-containing protein5.7e-5175.56Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFA VH IYGASNVAKFL+Q+PM LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFS
        TRAEIA L+SN Q+A+       +P  GPI  G S
Subjt:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFS

A0A1S3AY36 LOB domain-containing protein 24-like1.0e-6083.8Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF  VH IYGASNVAKFL QLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARP-MPNTVTEPIQGPISIGFSQIGLST
        TRAEIA ++SNVQE +P + +   +PIQGP S+GFSQIGLS+
Subjt:  TRAEIAFLSSNVQEARP-MPNTVTEPIQGPISIGFSQIGLST

A0A6J1E5I6 LOB domain-containing protein 24-like2.5e-6286.52Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRFA VH IYGASNVAKFL QLP+HLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIAFL+SN+QEA+P  +   +PIQGP +IGFSQIGLST
Subjt:  TRAEIAFLSSNVQEARPMPNTVTEPIQGPISIGFSQIGLST

A0A6J1JCD0 LOB domain-containing protein 24-like1.7e-6389.44Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFA VH IYGASNVAKFL QLP+HLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLSSNV-QEARPMPNTVTEPIQGPISIGFSQIGLST
        TRAEIAFL+SN+ QEA+P    V EPIQGP +IGFSQIGLST
Subjt:  TRAEIAFLSSNV-QEARPMPNTVTEPIQGPISIGFSQIGLST

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 233.5e-3763.64Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VH IYGA NV+K L+QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLSSNVQE
        IA   + + +
Subjt:  IAFLSSNVQE

P59468 LOB domain-containing protein 242.6e-3762.5Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VH IYGA NV+K L+QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLSSNVQEAR
        IA   + + + +
Subjt:  IAFLSSNVQEAR

Q8LBW3 LOB domain-containing protein 124.1e-3057.28Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +FA VH ++GASNV+K L++LP+H RA+A  +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEI
        AEI
Subjt:  AEI

Q9FKZ3 LOB domain-containing protein 366.5e-2851.92Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH ++GASNVAK L +L  + R +A  +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA

Q9SHE9 LOB domain-containing protein 44.8e-3156.31Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+FA VH ++GASNV K L++LP+H R +A  ++ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

Query:  AFL
          L
Subjt:  AFL

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 43.4e-3256.31Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+FA VH ++GASNV K L++LP+H R +A  ++ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

Query:  AFL
          L
Subjt:  AFL

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein2.9e-3157.28Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +FA VH ++GASNV+K L++LP+H RA+A  +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEI
        AEI
Subjt:  AEI

AT3G26620.1 LOB domain-containing protein 232.5e-3863.64Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VH IYGA NV+K L+QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLSSNVQE
        IA   + + +
Subjt:  IAFLSSNVQE

AT3G26660.1 LOB domain-containing protein 241.9e-3862.5Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VH IYGA NV+K L+QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLSSNVQEAR
        IA   + + + +
Subjt:  IAFLSSNVQEAR

AT5G66870.1 ASYMMETRIC LEAVES 2-like 14.6e-2951.92Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH ++GASNVAK L +L  + R +A  +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCGGGTCGCTGTGCAGCTTGCAAGTATCTCAGAAGAAGATGTCCTTCGGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAACCCTCAAAGATTTGCCACTGT
TCATACAATCTATGGAGCCAGTAATGTTGCTAAATTCCTTCGTCAACTTCCTATGCATCTCCGAGCTGAGGCAGCAGAAACTTTATTTTTTGAGGCAAAGTGCAGAATTG
AAGACCCAGTTTATGGGTGCGTTGGGATTATTTCTCAATTACAACATCAATTACACGTGGCGGAAACCCAGCTGGCCAAAACTCGGGCTGAGATTGCTTTTCTGAGTTCC
AATGTCCAAGAAGCCAGACCCATGCCCAATACTGTAACTGAGCCCATCCAAGGCCCAATTAGTATTGGGTTTTCTCAGATTGGGCTTTCCACTCAGCCCATTGGTTTAAC
TCCAGCTTTCCCAATTCCTAAC
mRNA sequenceShow/hide mRNA sequence
ATGATTTCGGGTCGCTGTGCAGCTTGCAAGTATCTCAGAAGAAGATGTCCTTCGGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAACCCTCAAAGATTTGCCACTGT
TCATACAATCTATGGAGCCAGTAATGTTGCTAAATTCCTTCGTCAACTTCCTATGCATCTCCGAGCTGAGGCAGCAGAAACTTTATTTTTTGAGGCAAAGTGCAGAATTG
AAGACCCAGTTTATGGGTGCGTTGGGATTATTTCTCAATTACAACATCAATTACACGTGGCGGAAACCCAGCTGGCCAAAACTCGGGCTGAGATTGCTTTTCTGAGTTCC
AATGTCCAAGAAGCCAGACCCATGCCCAATACTGTAACTGAGCCCATCCAAGGCCCAATTAGTATTGGGTTTTCTCAGATTGGGCTTTCCACTCAGCCCATTGGTTTAAC
TCCAGCTTTCCCAATTCCTAAC
Protein sequenceShow/hide protein sequence
MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFATVHTIYGASNVAKFLRQLPMHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLSS
NVQEARPMPNTVTEPIQGPISIGFSQIGLSTQPIGLTPAFPIPN