| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6574158.1 DNA-directed RNA polymerases II, IV and V subunit 6A, partial [Cucurbita argyrosperma subsp. sororia] | 4.3e-62 | 96.95 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEPPEPEMEEGAEEELDNNN DDV GEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | XP_022141284.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Momordica charantia] | 2.7e-64 | 100 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | XP_022923151.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 8.7e-63 | 97.71 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Y+DEPPEPE+EEGAEEELDNNNNDDV GEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | XP_022944842.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 4.3e-62 | 96.95 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEPPEPEMEEGAEEELDNNN DDV GEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | XP_038896917.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Benincasa hispida] | 5.1e-63 | 97.71 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEPPEPE+EEGAEEELD NNNDDVLGEP+EAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CI61 DNA-directed RNA polymerases II, IV and V subunit 6A | 1.3e-64 | 100 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1E614 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 4.2e-63 | 97.71 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Y+DEPPEPE+EEGAEEELDNNNNDDV GEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1FZ93 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 2.1e-62 | 96.95 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEPPEPEMEEGAEEELDNNN DDV GEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1HXF2 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 2.1e-62 | 96.95 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEPPEPEMEEGAEEELDNNN DDV GEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| | A0A6J1J2R7 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 4.2e-63 | 97.71 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Y+DEPPEPE+EEGAEEELDNNNNDDV GEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O88828 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 2.1e-27 | 60 | Show/hide | Query: DEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
D+ + E +EG + D N ++ E VE + + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IR
Subjt: DEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Query: RYLPDGSYEDWGVDELIVED
RYLPDGSYEDWGVDELI+ D
Subjt: RYLPDGSYEDWGVDELIVED
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| | P61219 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 2.1e-27 | 60 | Show/hide | Query: DEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
D+ + E +EG + D N ++ E VE + + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IR
Subjt: DEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIR
Query: RYLPDGSYEDWGVDELIVED
RYLPDGSYEDWGVDELI+ D
Subjt: RYLPDGSYEDWGVDELIVED
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| | Q32PE0 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 7.3e-28 | 64.22 | Show/hide | Query: EEELDNNNNDDVLGE-PVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
+E LD+ N + G+ VE + + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPDGSYEDW
Subjt: EEELDNNNNDDVLGE-PVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDW
Query: GVDELIVED
GVDELI+ D
Subjt: GVDELIVED
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| | Q9FJ98 DNA-directed RNA polymerases II, IV and V subunit 6A | 8.2e-56 | 84.62 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEP EPE+EEG EE+++ NDDV GEP+EAE+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
IRRYLPDGS+E+WGVDELIVEDSWKRQVGG
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
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| | Q9SJ96 DNA-directed RNA polymerases II and V subunit 6B | 2.9e-53 | 83.08 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEP EPE+EEG EE+ D NDDV +P+E E+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
IRRYLPD SYE+WGVDELIVEDSWKRQVGG
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G04630.1 RNA polymerase Rpb6 | 2.1e-54 | 83.08 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEP EPE+EEG EE+ D NDDV +P+E E+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
IRRYLPD SYE+WGVDELIVEDSWKRQVGG
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
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| | AT5G51940.1 RNA polymerase Rpb6 | 5.8e-57 | 84.62 | Show/hide | Query: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
YEDEP EPE+EEG EE+++ NDDV GEP+EAE+K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELR+RKIPFT
Subjt: YEDEPPEPEMEEGAEEELDNNNNDDVLGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFT
Query: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
IRRYLPDGS+E+WGVDELIVEDSWKRQVGG
Subjt: IRRYLPDGSYEDWGVDELIVEDSWKRQVGG
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