; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000393 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000393
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:1410011..1411950
RNA-Seq ExpressionMS000393
SyntenyMS000393
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141184.1 uncharacterized protein LOC111011640 [Momordica charantia]1.4e-5999.19Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDG SSSRSRTRSSLPHTSNQDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQMEKRAVEDEDERDHPMSPIN
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

XP_022984699.1 uncharacterized protein LOC111482903 isoform X1 [Cucurbita maxima]6.1e-4278.05Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQF+ET   WTNEKHMHFLNSMEASFVRSMF+NR H RRRLRLDRHL DT+DSTLDSPQK+RK H+ S    +DG SS RSR   SLPHTS QDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQME+RAVEDEDERDHP+SP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

XP_022984701.1 uncharacterized protein LOC111482903 isoform X2 [Cucurbita maxima]1.4e-4178.86Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQF+ET   WTNEKHMHFLNSMEASFVRSMF+NR H RRRLRLDRHL DT+DSTLDSPQK+RK H+ SG   +DG SS RSR   SLPHTS QDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQME+RAVEDEDERDHP+SP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

XP_038882732.1 uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]6.3e-4783.87Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQK-DRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQ
        MESHVQF+ETG  WTNEKHMHFLNSMEASFV+SMFENR H RRRLRLDRHLPDT+DSTLDSPQK D KNHATS A  I+G SS RSR  SSLPHTS QDQ
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQK-DRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQ

Query:  VVPQMEKRAVEDEDERDHPMSPIN
        VVPQ+EKRAVEDEDERDHPMSP+N
Subjt:  VVPQMEKRAVEDEDERDHPMSPIN

XP_038882735.1 uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida]9.1e-4683.87Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQK-DRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQ
        MESHVQF+ETG  WTNEKHMHFLNSMEASFV+SMFENR H RRRLRLDRHLPDT+DSTLDSPQK D KNHATS A  I+G SS RSR  SSLPHTS QDQ
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQK-DRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQ

Query:  VVPQMEKRAVEDEDERDHPMSPIN
        VVPQ+EKRAVEDEDERDHPMSP+N
Subjt:  VVPQMEKRAVEDEDERDHPMSPIN

TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein1.5e-4177.24Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQF +TG  WTNEKHMHFLNS+EASFVRSMF+NR H RR LRLDR LPDT+DSTLDSP    KNH TSG+A I+G S+ RSR  SS P+TS QDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQMEKRAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

A0A6J1CHV7 uncharacterized protein LOC1110116407.0e-6099.19Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDG SSSRSRTRSSLPHTSNQDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQMEKRAVEDEDERDHPMSPIN
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

A0A6J1E5I2 uncharacterized protein LOC111430892 isoform X11.9e-4177.24Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQF+ET   WTNEKHMHFLNSMEASFVRSMF+NR + RRRL+LDRHL DT+DSTLDSPQK+RK H+ S    +DG SS RSR   SLPHTS QDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQME+RAVEDEDERDHPMSP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

A0A6J1J606 uncharacterized protein LOC111482903 isoform X26.6e-4278.86Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQF+ET   WTNEKHMHFLNSMEASFVRSMF+NR H RRRLRLDRHL DT+DSTLDSPQK+RK H+ SG   +DG SS RSR   SLPHTS QDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQME+RAVEDEDERDHP+SP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X13.0e-4278.05Show/hide
Query:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV
        MESHVQF+ET   WTNEKHMHFLNSMEASFVRSMF+NR H RRRLRLDRHL DT+DSTLDSPQK+RK H+ S    +DG SS RSR   SLPHTS QDQV
Subjt:  MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQV

Query:  VPQMEKRAVEDEDERDHPMSPIN
        VPQME+RAVEDEDERDHP+SP+N
Subjt:  VPQMEKRAVEDEDERDHPMSPIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGCACGTGCAATTCAACGAAACGGGGTCGTGTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCCTTCGTCCGATCAATGTTCGAAAA
TCGCACCCACCGCCGCCGCCGTCTACGGCTGGACCGCCACCTGCCGGACACGTCAGACTCAACCCTAGATTCCCCTCAGAAGGACAGAAAAAACCACGCCACCTCCGGAG
CTGCTACAATCGACGGTGGATCTAGCAGCAGATCAAGGACTAGATCATCTCTACCGCACACTTCAAATCAAGATCAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAG
GATGAAGATGAGAGAGACCATCCCATGTCACCTATCAAC
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGCACGTGCAATTCAACGAAACGGGGTCGTGTTGGACCAATGAGAAGCACATGCACTTCTTGAATTCCATGGAAGCTTCCTTCGTCCGATCAATGTTCGAAAA
TCGCACCCACCGCCGCCGCCGTCTACGGCTGGACCGCCACCTGCCGGACACGTCAGACTCAACCCTAGATTCCCCTCAGAAGGACAGAAAAAACCACGCCACCTCCGGAG
CTGCTACAATCGACGGTGGATCTAGCAGCAGATCAAGGACTAGATCATCTCTACCGCACACTTCAAATCAAGATCAGGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAG
GATGAAGATGAGAGAGACCATCCCATGTCACCTATCAAC
Protein sequenceShow/hide protein sequence
MESHVQFNETGSCWTNEKHMHFLNSMEASFVRSMFENRTHRRRRLRLDRHLPDTSDSTLDSPQKDRKNHATSGAATIDGGSSSRSRTRSSLPHTSNQDQVVPQMEKRAVE
DEDERDHPMSPIN