CuGenDBv2

Gene ID	MS000399
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	25.3 kDa vesicle transport protein
Genome location	scaffold44:1446398..1448159
RNA-Seq Expression	MS000399
Synteny	MS000399
Gene Ontology terms	GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0048280 - vesicle fusion with Golgi apparatus (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0005793 - endoplasmic reticulum-Golgi intermediate compartment (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031201 - SNARE complex (cellular component) GO:0005484 - SNAP receptor activity (molecular function)
InterPro domains	IPR010908 - Longin domain IPR011012 - Longin-like domain superfamily IPR044565 - Vesicle-trafficking protein Sec22

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022141127.1 LOW QUALITY PROTEIN: 25.3 kDa vesicle transport protein [Momordica charantia]

6.9e-111

90.25

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        IVGRLRDGLPLAQGIGYFNEEN DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPG-RCPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT
        N LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNA+P  RCPDIVTCSLFEILERKKL                 RISLN GCCCQATAVKWVPMVVT
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPG-RCPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT

Query:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
Subjt:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

XP_022944814.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata]

1.0e-82

68.78

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDG+PLAQGI Y NEEN DVLGYKQQAEFILK ISRGA SP KM I +HH  FIYL+ENGVC +TLCDS YPRKLA+HYLQDLQ+E +KFDDAL+
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV
        N L KP SF KFD II NIRKRYIDTRTQ NL+KLN   G+   D+VTCS FEI E R+K+    ERSICNAN   +W  S+      +   +KW P+VV
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV

Query:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        TFGVVL++LWASF+LF ISLSHHN+FVILYNNRKL H
Subjt:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

XP_022968542.1 25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]

6.1e-83

69.62

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDG+PLAQGI Y NEEN DVLGYKQQAEFILK ISRGA S  KMAI +HH  FIYL+ENGVC +TLCDS YPRKLA+HYLQDLQ+E +KFDDAL+
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV
        N L KP SF KFD IISNIRKRYIDTRTQ NL+KLN    +   DIVTCS+ EI E R+K+  MVERSICNAN   +W  S       +   +KW P+VV
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV

Query:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        TFGVVL++LWASF+LF ISLSHHN+FVILYNNRKL H
Subjt:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

XP_023541413.1 25.3 kDa vesicle transport protein [Cucurbita pepo subsp. pepo]

7.4e-81

67.51

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Query:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDG+PLAQGI Y NEE +DVLGYKQQAEFILK ISRGA S  KMAI +HH  FIYL+ENGVC +TLCDS YPRKLA+HYLQDLQ+E +KFDDAL+
Subjt:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV
        N L KP S+ KFD IISNIRKRYIDTRTQANL+KLN + G+   D++TCS  EI E R+K+   +ERSICNAN   +W  S       +   +KW PMVV
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV

Query:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        TFG VL++LWASF+LF ISL+HHN+FVILYNNRKL H
Subjt:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

XP_038875892.1 25.3 kDa vesicle transport protein [Benincasa hispida]

1.8e-82

70.76

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDGLP+AQGI Y NEEN DVLGYK+QAEFILK ISRG  S SKMAIL+HH CFIYLVENGVC +TLCDSSYPRKLALHYLQDLQKE+ +F+ ALI
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRC-PDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT
        N L KP S  +FD IISNIRK+YIDTRTQANL KLNA+  +  PD++TCSL EILER++   MVERS+CN         S+    C Q   +KW PMVVT
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRC-PDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT

Query:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        FGVVL+ILWASF+LF ISLS HNEFVILYNNRKL H
Subjt:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBE2 Longin domain-containing protein

1.4e-80

70.21

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDGLP+AQGI Y NEEN DV GYK+QAEFILK ISRG  SP KM IL+HH  FIYLVENGVC +TLCDSSYPRKLA+HYLQDLQKE  KFDDALI
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGR-CPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGC-CCQATAVKWVPMVV
        N L KP SF KFD IISN+RK+YIDTRTQANL KLNA+  +  PDI TCSL EILER++   MVERS  N N          +G    +   VKW PMVV
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGR-CPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGC-CCQATAVKWVPMVV

Query:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKL
        TFGVVL++LWASF+LF ISLSHHN+FVILYNNRKL
Subjt:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKL

A0A1S3AYX3 25.3 kDa vesicle transport protein isoform X1

1.2e-79

69.23

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDGLP+AQGI Y NEEN DV GYK+QAEFILK ISRG  SP KM IL+HH  FIYLVENGVC +TLCDSSYPRKLALHYLQDLQKE  KFDDALI
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGR-CPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT
        N L KP SF KFD IISN+RK+YIDTRTQ NL KLNA+  +  PDI++CS  EILER++   + ERS CN N Q     S+      +   +KW PMVVT
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGR-CPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT

Query:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKL
        FGVVL++LWASF+LF ISLSHHN+FVILYNNRKL
Subjt:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKL

A0A6J1CIZ8 LOW QUALITY PROTEIN: 25.3 kDa vesicle transport protein

3.3e-111

90.25

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        IVGRLRDGLPLAQGIGYFNEEN DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPG-RCPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT
        N LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNA+P  RCPDIVTCSLFEILERKKL                 RISLN GCCCQATAVKWVPMVVT
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPG-RCPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVT

Query:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
Subjt:  FGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

A0A6J1FZ74 25.3 kDa vesicle transport protein isoform X1

5.0e-83

68.78

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDG+PLAQGI Y NEEN DVLGYKQQAEFILK ISRGA SP KM I +HH  FIYL+ENGVC +TLCDS YPRKLA+HYLQDLQ+E +KFDDAL+
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV
        N L KP SF KFD II NIRKRYIDTRTQ NL+KLN   G+   D+VTCS FEI E R+K+    ERSICNAN   +W  S+      +   +KW P+VV
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV

Query:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        TFGVVL++LWASF+LF ISLSHHN+FVILYNNRKL H
Subjt:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

A0A6J1HTS6 25.3 kDa vesicle transport protein isoform X1

2.9e-83

69.62

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Query:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        +VGR+RDG+PLAQGI Y NEEN DVLGYKQQAEFILK ISRGA S  KMAI +HH  FIYL+ENGVC +TLCDS YPRKLA+HYLQDLQ+E +KFDDAL+
Subjt:  IVGRLRDGLPLAQGIGYFNEEN-DVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV
        N L KP SF KFD IISNIRKRYIDTRTQ NL+KLN    +   DIVTCS+ EI E R+K+  MVERSICNAN   +W  S       +   +KW P+VV
Subjt:  N-LTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCP-DIVTCSLFEILE-RKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVV

Query:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH
        TFGVVL++LWASF+LF ISLSHHN+FVILYNNRKL H
Subjt:  TFGVVLLILWASFVLFHISLSHHNEFVILYNNRKLIH

SwissProt top hits

e value

%identity

Alignment

O08547 Vesicle-trafficking protein SEC22b

7.1e-18

30.77

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Query:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKEL-AKFDDAL
        ++ R+ DGLPLA  +    +   D+  Y+ QA+ + + ++    SP++  +      F Y++E GVC + LC++++P+KLA  YL+DL  E   +    +
Subjt:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKEL-AKFDDAL

Query:  INLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER
          +++P SF +FD  I   +K YID+R + NL  +N +      I+  ++ E+L+R
Subjt:  INLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER

Q5ZJW4 Vesicle-trafficking protein SEC22b

1.9e-18

31.41

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Query:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKEL-AKFDDAL
        ++ R+ DGLPLA  +    +   D+  Y+ QA+ + + ++    SP++  +      F Y++E GVC + LC++++P+KLA  YL+DLQ E   +    +
Subjt:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKEL-AKFDDAL

Query:  INLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER
          +++P SF +FD  I   +K YID+R + NL  +N +      I+  ++ E+L+R
Subjt:  INLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER

Q7SXP0 Vesicle-trafficking protein SEC22b-B

1.4e-18

31.87

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Query:  IVGRLRDGLPLAQGIGYFNEENDVLG-----YKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKEL-AKF
        ++ RL DGLPLA  +    +E++ +G     Y+ QA+ + + ++    SP++  +      F Y++E GVC + LC++ +P+KLA  YL+DLQ E   + 
Subjt:  IVGRLRDGLPLAQGIGYFNEENDVLG-----YKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKEL-AKF

Query:  DDALINLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER
           +  +++P SF +FD  I   +K YID+R + NL  +N +      I+  ++ E+L+R
Subjt:  DDALINLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER

Q7ZV15 Vesicle-trafficking protein SEC22b-A

4.2e-18

31.41

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Query:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI
        ++ R+ D LPLA  +    +   D+  Y+ QA+ + + ++    SP++  +     CF Y++E GVC + LC++ +P+KLA  YL+DL+ E ++   A +
Subjt:  IVGRLRDGLPLAQGIGYFNEE-NDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI

Query:  -NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER
         ++++P SF +FD  I    K YID+R + NL  +N++      I+  ++ E+L+R
Subjt:  -NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILER

Q94AU2 25.3 kDa vesicle transport protein

8.1e-30

36.54

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Query:  IVGRLRDGLPLAQGIGYFNEENDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI-
        ++ R+ DGLPLA+G+    +  D   YKQQ + + K++SRG    S+M++      F Y++E  VC +T+CD SYP+KLA  YL+DL+ E  + +   I 
Subjt:  IVGRLRDGLPLAQGIGYFNEENDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI-

Query:  NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEIL-ERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVTF
           +P +F KFD  I   +K Y DTRTQ N+ KLN +      I+T ++ E+L   +KLD + E S    +   ++          QA   KW P+ + F
Subjt:  NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEIL-ERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVTF

Query:  GVVLLILW
        GVV L+ W
Subjt:  GVVLLILW

Arabidopsis top hits

e value

%identity

Alignment

AT1G11890.1 Synaptobrevin family protein

5.7e-31

36.54

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Query:  IVGRLRDGLPLAQGIGYFNEENDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI-
        ++ R+ DGLPLA+G+    +  D   YKQQ + + K++SRG    S+M++      F Y++E  VC +T+CD SYP+KLA  YL+DL+ E  + +   I 
Subjt:  IVGRLRDGLPLAQGIGYFNEENDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALI-

Query:  NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEIL-ERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVTF
           +P +F KFD  I   +K Y DTRTQ N+ KLN +      I+T ++ E+L   +KLD + E S    +   ++          QA   KW P+ + F
Subjt:  NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEIL-ERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVTF

Query:  GVVLLILW
        GVV L+ W
Subjt:  GVVLLILW

AT5G52270.1 SNARE-like superfamily protein

9.8e-39

54.04

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Query:  IVGRLRDGLPLAQGIGYFNEENDV--LGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDD-A
        IVGR+ DGLPLAQ   Y N+E++   L YKQQAEF+LK +S+ +    KM IL+ H  F +LVE  +C I L DSSYPRKL  +YLQ+L KEL K D+ A
Subjt:  IVGRLRDGLPLAQGIGYFNEENDV--LGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDD-A

Query:  LI-NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILERKKL
        LI  ++KP SF +F +II  IRK+YIDTRTQANL KLNA   +  D+VT  L +I++R+++
Subjt:  LI-NLTKPNSFAKFDRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILERKKL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATTGTTGGAAGGCTTAGGGATGGGCTGCCACTTGCACAGGGCATTGGGTATTTTAATGAAGAGAATGATGTTTTAGGCTACAAACAGCAAGCTGAATTCATACTCAAACA
CATCTCTAGAGGGGCCTTCTCACCTTCAAAAATGGCCATTCTGATTCATCATCAATGTTTCATTTACTTGGTGGAGAATGGTGTCTGCTGCATCACATTGTGCGATTCTT
CATACCCAAGAAAGCTGGCTCTCCATTACTTGCAAGATTTGCAAAAGGAGCTTGCCAAGTTTGATGATGCCCTAATAAACCTTACCAAACCCAATAGTTTTGCCAAATTT
GATAGAATAATTAGCAATATTAGAAAACGGTACATTGATACAAGGACACAAGCCAATCTACATAAGCTCAATGCAGATCCTGGCAGGTGTCCAGACATTGTCACATGTTC
ACTCTTTGAAATTTTAGAAAGGAAAAAACTAGATCATATGGTGGAAAGATCAATCTGTAATGCAAATCCCCAACCTGTTTGGAGGATAAGCCTTAATTTTGGATGTTGTT
GTCAGGCAACTGCCGTAAAATGGGTGCCAATGGTTGTAACTTTTGGTGTGGTGCTTTTGATTCTTTGGGCTTCCTTTGTTCTCTTTCACATCTCATTATCTCATCATAAT
GAATTTGTAATTCTATATAACAACAGAAAACTGATTCAC

mRNA sequence

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Protein sequence

Show/hide protein sequence

IVGRLRDGLPLAQGIGYFNEENDVLGYKQQAEFILKHISRGAFSPSKMAILIHHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALINLTKPNSFAKF
DRIISNIRKRYIDTRTQANLHKLNADPGRCPDIVTCSLFEILERKKLDHMVERSICNANPQPVWRISLNFGCCCQATAVKWVPMVVTFGVVLLILWASFVLFHISLSHHN
EFVILYNNRKLIH

MS000399 (gene) of Bitter gourd (TR) v1 genome