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MS000401 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000401
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRemorin-like
Genome locationscaffold44:1451340..1451722
RNA-Seq ExpressionMS000401
SyntenyMS000401
Gene Ontology termsGO:0042221 - response to chemical (biological process)
InterPro domainsIPR005516 - Remorin, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033641.1 remorin-like [Cucumis melo var. makuwa]4.2e-0958.06Show/hide
Query:  KMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD
        K++LKE+EKV++KE +TH A ESKKA IE +R  +K K+E++A  HR TN+VP KCFGI  D
Subjt:  KMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD

KAF5732350.1 Remorin family protein [Tripterygium wilfordii]1.6e-0845.16Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKI-IEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG
        RA+R++A TEAWE  K+A L+AK K+I IEAE    +K K++E++++KE       + +KA IE +R     K+E+KA+K+R++NS P K FG
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKI-IEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG

KGN57373.1 hypothetical protein Csa_010046 [Cucumis sativus]1.1e-1455.21Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD
        +AER++ASTEAW++SK+A L+A+ KK I+A++  K++L+ +EKV++KE +TH A ESKKA IE +R  +K K+E KA  HR TN+VP KCFGI  D
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD

XP_004140777.2 remorin [Cucumis sativus]4.6e-0844.68Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        RA +K+++  +WE+SK+A ++A+ K+I   E   K K + IEK+++K    H  AE KKA+IE +R  +K K EE AAKHR+T + P K FG F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

XP_022867512.1 remorin-like [Olea europaea var. sylvestris]4.6e-0846.81Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        +A++K++S EAWE+SK+A L+A+ KK IE E+  K K + +EK+++K    H AAE K+AIIE +R     K EE AAK+R+T + P K  G F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

TrEMBL top hitse value%identityAlignment
A0A0A0L6I9 Remorin_C domain-containing protein5.5e-1555.21Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD
        +AER++ASTEAW++SK+A L+A+ KK I+A++  K++L+ +EKV++KE +TH A ESKKA IE +R  +K K+E KA  HR TN+VP KCFGI  D
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD

A0A0A0L9S3 Uncharacterized protein2.2e-0844.68Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        RA +K+++  +WE+SK+A ++A+ K+I   E   K K + IEK+++K    H  AE KKA+IE +R  +K K EE AAKHR+T + P K FG F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

A0A5D3DHT0 Remorin-like2.0e-0958.06Show/hide
Query:  KMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD
        K++LKE+EKV++KE +TH A ESKKA IE +R  +K K+E++A  HR TN+VP KCFGI  D
Subjt:  KMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD

A0A7J7CAJ4 Remorin2.9e-0846.81Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        +A +KI+S EAWE+SK+A ++A+ K+I   E   K K + +EK+++K    H AAE K+AIIE +R     K EE AAKHR+T +VP K  G F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

A0A7J7CE28 Remorin family protein7.7e-0945.16Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKI-IEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG
        RA+R++A TEAWE  K+A L+AK K+I IEAE    +K K++E++++KE       + +KA IE +R     K+E+KA+K+R++NS P K FG
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKI-IEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG

SwissProt top hitse value%identityAlignment
O80837 Remorin6.9e-0738.3Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        RA++KI+   AWE+SK+A ++A+ +KI   E   K K +  EK+++K    H  AE K+A++E ++  +  K EE  AK+R+T  VP    G F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

P93788 Remorin2.1e-0841.49Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        +A++K+++  AWE+SK+A L+A+ KK+   E   K K +  EK+++K    H  AE K+A+IE +R     K EE AAK+R+T + P K  GIF
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

Q9FFA5 Remorin 1.44.8e-0839.13Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG
        +AE+K++S  +WE++K+A ++A+ KK+   E   K K + +E++++K    H  AE K+A+IE +R  +  K EE AAK+R+T + P K FG
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG

Q9M2D8 Uncharacterized protein At3g612606.2e-0841.49Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        +AE+KIA   AWE+SK+A ++A+ KKI   E   K K +  E++++K    H  AE ++A+IE +R     K EE AAK+R+T  VP    G F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

Arabidopsis top hitse value%identityAlignment
AT2G45820.1 Remorin family protein4.9e-0838.3Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        RA++KI+   AWE+SK+A ++A+ +KI   E   K K +  EK+++K    H  AE K+A++E ++  +  K EE  AK+R+T  VP    G F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

AT3G48940.1 Remorin family protein4.0e-1041.49Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        +A++KI+S  AWE+SK+A ++A+ KKI   E   K K    E++++K    H  AE K+A+ E +R     K EE AAK+R+T + P+K FG F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

AT3G61260.1 Remorin family protein4.4e-0941.49Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF
        +AE+KIA   AWE+SK+A ++A+ KKI   E   K K +  E++++K    H  AE ++A+IE +R     K EE AAK+R+T  VP    G F
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIF

AT5G23750.1 Remorin family protein3.4e-0939.13Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG
        +AE+K++S  +WE++K+A ++A+ KK+   E   K K + +E++++K    H  AE K+A+IE +R  +  K EE AAK+R+T + P K FG
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG

AT5G23750.2 Remorin family protein3.4e-0939.13Show/hide
Query:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG
        +AE+K++S  +WE++K+A ++A+ KK+   E   K K + +E++++K    H  AE K+A+IE +R  +  K EE AAK+R+T + P K FG
Subjt:  RAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGCAGAAGTGTCCGGCAA
GATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGA
AGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC
mRNA sequenceShow/hide mRNA sequence
TTGATGAGAGCTGAACGGAAAATAGCTTCCACTGAAGCATGGGAGAGCTCCAAGCAAGCTCCTCTTAAAGCTAAAGAAAAGAAGATTATTGAGGCAGAAGTGTCCGGCAA
GATGAAGTTGAAGGAGATTGAGAAGGTAAGAGACAAAGAGTTAGACACACATATAGCAGCGGAATCAAAAAAAGCAATTATTGAGATTGAGAGAAATCATCAAAAACAGA
AGATTGAGGAGAAAGCTGCCAAACATCGGTCTACCAATTCTGTTCCATCCAAGTGTTTTGGTATTTTCAAAGAC
Protein sequenceShow/hide protein sequence
LMRAERKIASTEAWESSKQAPLKAKEKKIIEAEVSGKMKLKEIEKVRDKELDTHIAAESKKAIIEIERNHQKQKIEEKAAKHRSTNSVPSKCFGIFKD