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MS000404 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000404
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRemorin family protein
Genome locationscaffold44:1463644..1464029
RNA-Seq ExpressionMS000404
SyntenyMS000404
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0010033 - response to organic substance (biological process)
GO:1901700 - response to oxygen-containing compound (biological process)
InterPro domainsIPR005516 - Remorin, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033641.1 remorin-like [Cucumis melo var. makuwa]1.3e-1059.7Show/hide
Query:  EAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED
        +A+L +L+LK +EKV+NKEAE+H A ESKKA+IE +R+ +K KVE++A  HR TNT+P KCFGI  D
Subjt:  EAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED

KGN57373.1 hypothetical protein Csa_010046 [Cucumis sativus]9.7e-1959.57Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED
        +AER++ASTEAW++SK+ A   +VKKI+A+L +L+L+ +EKV+NKEAE+H A ESKKA+IE +R+ +K KVE KA  HR TNT+P KCFGI  D
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED

TYK22939.1 remorin [Cucumis melo var. makuwa]2.2e-1048.39Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE
        RA +K+++  +WE+SK+ A   ++K+IE +LE+ K + IEK++NK A  H  AE KKA IE +R  +K K EE AAKHR+T T P K FG F+
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE

XP_004140777.2 remorin [Cucumis sativus]9.7e-1152.87Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSK
        +AER++ASTEAW++SK+ A   +VKKI+A+L +L+L+ +EKV+NKEAE+H A ESKKA+IE +R+ +K KVE KA   +S   +P +
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSK

XP_022867512.1 remorin-like [Olea europaea var. sylvestris]2.2e-1047.83Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF
        +A++K++S EAWE+SK+ +   ++KKIE ELE+ K + +EK++NK A  H AAE K+A IE +R     K EE AAK+R+T T P K  G F
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF

TrEMBL top hitse value%identityAlignment
A0A0A0L6I9 Remorin_C domain-containing protein4.7e-1959.57Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED
        +AER++ASTEAW++SK+ A   +VKKI+A+L +L+L+ +EKV+NKEAE+H A ESKKA+IE +R+ +K KVE KA  HR TNT+P KCFGI  D
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED

A0A1S3AXW2 remorin1.0e-1048.39Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE
        RA +K+++  +WE+SK+ A   ++K+IE +LE+ K + IEK++NK A  H  AE KKA IE +R  +K K EE AAKHR+T T P K FG F+
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE

A0A5A7SRU5 Remorin1.0e-1048.39Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE
        RA +K+++  +WE+SK+ A   ++K+IE +LE+ K + IEK++NK A  H  AE KKA IE +R  +K K EE AAKHR+T T P K FG F+
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE

A0A5D3DHT0 Remorin-like6.1e-1159.7Show/hide
Query:  EAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED
        +A+L +L+LK +EKV+NKEAE+H A ESKKA+IE +R+ +K KVE++A  HR TNT+P KCFGI  D
Subjt:  EAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED

A0A5D3DI57 Remorin1.0e-1048.39Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE
        RA +K+++  +WE+SK+ A   ++K+IE +LE+ K + IEK++NK A  H  AE KKA IE +R  +K K EE AAKHR+T T P K FG F+
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFE

SwissProt top hitse value%identityAlignment
O80837 Remorin1.1e-0940.22Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF
        RA++KI+   AWE+SK+ A   +++KIE +LE+ K +  EK++NK A  H  AE K+A +E ++  +  K EE  AK+R+T  +P    G F
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF

P93788 Remorin1.3e-1043.48Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF
        +A++K+++  AWE+SK+     ++KK+E +LE+ K +  EK++NK A  H  AE K+A IE +R     K EE AAK+R+T T P K  GIF
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF

Q9FFA5 Remorin 1.42.0e-1143.33Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFG
        +AE+K++S  +WE++K+ A   ++KK+E +LE+ K + +E+++NK A+ H  AE K+A IE +R  +  K EE AAK+R+T T P K FG
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFG

Q9M2D8 Uncharacterized protein At3g612601.0e-1043.48Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF
        +AE+KIA   AWE+SK+ A   ++KKIE +LE+ K +  E+++NK A  H  AE ++A IE +R     K EE AAK+R+T  +P    G F
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF

Arabidopsis top hitse value%identityAlignment
AT2G45820.1 Remorin family protein7.9e-1140.22Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF
        RA++KI+   AWE+SK+ A   +++KIE +LE+ K +  EK++NK A  H  AE K+A +E ++  +  K EE  AK+R+T  +P    G F
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF

AT3G48940.1 Remorin family protein3.2e-1243.48Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF
        +A++KI+S  AWE+SK+ +   ++KKIE +L + K    E+++NK A+ H  AE K+A  E +R     K EE AAK+R+T T P+K FG F
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF

AT3G61260.1 Remorin family protein7.2e-1243.48Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF
        +AE+KIA   AWE+SK+ A   ++KKIE +LE+ K +  E+++NK A  H  AE ++A IE +R     K EE AAK+R+T  +P    G F
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIF

AT5G23750.1 Remorin family protein1.4e-1243.33Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFG
        +AE+K++S  +WE++K+ A   ++KK+E +LE+ K + +E+++NK A+ H  AE K+A IE +R  +  K EE AAK+R+T T P K FG
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFG

AT5G23750.2 Remorin family protein1.4e-1243.33Show/hide
Query:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFG
        +AE+K++S  +WE++K+ A   ++KK+E +LE+ K + +E+++NK A+ H  AE K+A IE +R  +  K EE AAK+R+T T P K FG
Subjt:  RAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGATCAGAGCTGAACGAAAGATAGCTTCCACTGAAGCATGGGAGAGCTCAAAGCAAGTTGCTTCGGGAGTTAAAGTCAAAAAGATTGAGGCTGAATTGGAGAGATTAAA
GCTAAAGATGATTGAGAAGGTACGAAACAAAGAGGCAGAATCACATATAGCAGCAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAAGCATCAAAAACAGAAGGTTG
AGGAGAAAGCTGCTAAGCATCGCTCTACCAATACAATTCCATCCAAGTGTTTTGGTATTTTCGAAGAC
mRNA sequenceShow/hide mRNA sequence
TTGATCAGAGCTGAACGAAAGATAGCTTCCACTGAAGCATGGGAGAGCTCAAAGCAAGTTGCTTCGGGAGTTAAAGTCAAAAAGATTGAGGCTGAATTGGAGAGATTAAA
GCTAAAGATGATTGAGAAGGTACGAAACAAAGAGGCAGAATCACATATAGCAGCAGAATCAAAGAAAGCAAACATTGAGGTTGAGAGAAAGCATCAAAAACAGAAGGTTG
AGGAGAAAGCTGCTAAGCATCGCTCTACCAATACAATTCCATCCAAGTGTTTTGGTATTTTCGAAGAC
Protein sequenceShow/hide protein sequence
LIRAERKIASTEAWESSKQVASGVKVKKIEAELERLKLKMIEKVRNKEAESHIAAESKKANIEVERKHQKQKVEEKAAKHRSTNTIPSKCFGIFED