; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000407 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000407
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger CCHC domain-containing protein 9
Genome locationscaffold44:1477129..1479697
RNA-Seq ExpressionMS000407
SyntenyMS000407
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003779 - actin binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574179.1 hypothetical protein SDJN03_28066, partial [Cucurbita argyrosperma subsp. sororia]1.4e-13185.93Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI
        MVS+RQKLARKKY+E HPELFPKAEPTPPKDPEKKKKKK + K       DPNKP +KGFKKHPLRVPGM+PGESCFICKAKDHIAKFCPEKAQWEKNKI
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI

Query:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR
        CLLCRRRGHSLKNCPDK+E T DKKLCYNCG+TGHSLANCPQPLQ GGT+FANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP KGT+
Subjt:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR

Query:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        V A  G SGNRSSGY+EM RRP TRLVSGDDLEDDFM++ED+LQI DAK GKKKGPKVVKF+D
Subjt:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

XP_022141136.1 uncharacterized protein LOC111011601 [Momordica charantia]3.1e-15299.24Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI
        MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGM+PGESCFICKAKDHIAK CPEKAQWEKNKI
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI

Query:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR
        CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR
Subjt:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR

Query:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
Subjt:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

XP_022945772.1 uncharacterized protein LOC111449917 [Cucurbita moschata]8.0e-13286.25Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEK---KKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQ
        MVS+RQKLARKKY+E HPELFPKAEPTPPKDPEK   KKKKKS+FKR K ES    DP KP KKGFKKHPLRVPGM+PGESCFICKAKDHIAKFCPEKAQ
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEK---KKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQ

Query:  WEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
        WEKNKICLLCRRRGHSLKNCPDK+E T DKKLCYNCG+TGHSLANCPQPLQ GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
Subjt:  WEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC

Query:  PNKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        P KGT+V A  G SGNRSSGY+EM RRP T+LVSGDDLEDDFM++ED+LQI DAK GKKKGPKVVKF+D
Subjt:  PNKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

XP_022967999.1 uncharacterized protein LOC111467373 [Cucurbita maxima]6.1e-13286.47Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK
        MVS+RQKLARKKY+E HPELFPKAEPTPPKDPE KKKKKS+FKR K ES    DPNKP KKGFKKHPLRVPGM+PGESCFICKAKDHIAKFCPEKAQWEK
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK

Query:  NKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NKICLLCRRRGHSLKNCPDK+E T DKKLCYNCG+TGHSLANCPQPLQ GGTK+ANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP K
Subjt:  NKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        GT+V A  G+S NRSSGY+EM RRP TRLVSGDDLEDDFM++ED+LQI DAK G KKGPKVVKF+D
Subjt:  GTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

XP_023542027.1 uncharacterized protein LOC111802000 [Cucurbita pepo subsp. pepo]1.0e-13186.19Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPE--KKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQW
        MVS+RQKLARKKY+E HPELFPKAEPTPPKDPE  KKKKKKS+FKR K ES    DPNKP KKGFKKHPLRVPGM+PGESCFICKAKDHIAKFCPEKAQW
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPE--KKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQW

Query:  EKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP
        EKNKICLLCRRRGHSLKNCPDK+E T DKKLCYNCG+TGHSLANCPQPLQ GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP
Subjt:  EKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP

Query:  NKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
         KGT+V A  G+S NRSSGY+EM RRP T+LVSGDDLEDDFM++ED+LQI DAK GKKK PKVVKF+D
Subjt:  NKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

TrEMBL top hitse value%identityAlignment
A0A0A0L9S9 Uncharacterized protein1.5e-13186.09Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK
        MV+QRQ+LARKKYKE HPELFPKAEPTPPKDP+ KKKKKSKFKR K ES   +DP KP KKGFKKHPLRVPGM+PGESCFICKA DHIAK CPEKAQWEK
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK

Query:  NKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NKICLLCRRRGHSLKNCPDK+EGT DKKLCYNCG+TGHSLANCPQPLQDGGTKFA+CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP K
Subjt:  NKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        GT+V   AG+ G RSSGY+EMPRRP T+L+SGDDLEDDFMIDE  LQI DAK GKKKGPKVVKF+D
Subjt:  GTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

A0A5D3DHA5 Zinc finger CCHC domain-containing protein 95.6e-13182.04Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK
        MVSQRQ+LARKKY+E HPELFPKAEPTPPKDP+  KKKKSKFKR K ES   +DPNKP KKGFKKHPLRVPGM+PGESCFICKAKDHIAK CPEKAQWEK
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK

Query:  NK------------------ICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGG
        NK                  ICLLCRRRGHSLKNCPDK+EGT DKKLCYNCG+TGHSLANCPQPLQDGGTKFA+CFICNESGHLSKNCPKNTHGIYPKGG
Subjt:  NK------------------ICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGG

Query:  CCKTCGEVTHLAKDCPNKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        CCKTCGEVTHLAKDCP KGT+V   AG+SG RSSGY+EMPRRP T+LVSGDDLEDDFMIDED LQI DAK GKKKGPKVVKF+D
Subjt:  CCKTCGEVTHLAKDCPNKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

A0A6J1CI48 uncharacterized protein LOC1110116011.5e-15299.24Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI
        MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGM+PGESCFICKAKDHIAK CPEKAQWEKNKI
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI

Query:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR
        CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR
Subjt:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR

Query:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
Subjt:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

A0A6J1G1V2 uncharacterized protein LOC1114499173.9e-13286.25Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEK---KKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQ
        MVS+RQKLARKKY+E HPELFPKAEPTPPKDPEK   KKKKKS+FKR K ES    DP KP KKGFKKHPLRVPGM+PGESCFICKAKDHIAKFCPEKAQ
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEK---KKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQ

Query:  WEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
        WEKNKICLLCRRRGHSLKNCPDK+E T DKKLCYNCG+TGHSLANCPQPLQ GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
Subjt:  WEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC

Query:  PNKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        P KGT+V A  G SGNRSSGY+EM RRP T+LVSGDDLEDDFM++ED+LQI DAK GKKKGPKVVKF+D
Subjt:  PNKGTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

A0A6J1HYC2 uncharacterized protein LOC1114673733.0e-13286.47Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK
        MVS+RQKLARKKY+E HPELFPKAEPTPPKDPE KKKKKS+FKR K ES    DPNKP KKGFKKHPLRVPGM+PGESCFICKAKDHIAKFCPEKAQWEK
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAES---KDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEK

Query:  NKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK
        NKICLLCRRRGHSLKNCPDK+E T DKKLCYNCG+TGHSLANCPQPLQ GGTK+ANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP K
Subjt:  NKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNK

Query:  GTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD
        GT+V A  G+S NRSSGY+EM RRP TRLVSGDDLEDDFM++ED+LQI DAK G KKGPKVVKF+D
Subjt:  GTRVSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD

SwissProt top hitse value%identityAlignment
Q04832 DNA-binding protein HEXBP2.8e-1829.73Show/hide
Query:  PGMQPGESCFICKAKDHIAKFCPEKAQW--EKNKICLLCRRRGHSLKNCPDKS-EGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLS
        P  +   SC  C  + H A+ CPE      E++  C  C   GH  + CP+++  G      C+ CG+ GH   +CP   + G  K   C+ C + GHLS
Subjt:  PGMQPGESCFICKAKDHIAKFCPEKAQW--EKNKICLLCRRRGHSLKNCPDKS-EGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLS

Query:  KNCPKN----------------THGIYPKGGCCKTCGEVTHLAKDCPN
        ++CP +                  G Y     C  CG+  H+++DCPN
Subjt:  KNCPKN----------------THGIYPKGGCCKTCGEVTHLAKDCPN

Q8N567 Zinc finger CCHC domain-containing protein 97.0e-2237.23Show/hide
Query:  ICLLCRRRGHSLKNCPDKSEGTE-DKKLCYNCGQTGHSLANCPQPLQD--GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP-
        +C  CR+ GH + +CP   E  +    +CY CG T H +  C   +    G   FA CF+C E GHLS++CP N  G+Y  GG CK CG V HL KDCP 
Subjt:  ICLLCRRRGHSLKNCPDKSEGTE-DKKLCYNCGQTGHSLANCPQPLQD--GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCP-

Query:  -NKGTRVSAAAGISGNRSSGYMEM-----PRRPATRL
             R+      +   S+ Y E+     P++P T++
Subjt:  -NKGTRVSAAAGISGNRSSGYMEM-----PRRPATRL

Q8R1J3 Zinc finger CCHC domain-containing protein 91.3e-2043.88Show/hide
Query:  ICLLCRRRGHSLKNCPDKSEGTE-DKKLCYNCGQTGHSLANCPQPLQD--GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC
        +C  CR+ GH + +CP   E  +    +CY CG T H ++ C   +    G   FA CF+C E GHLS++CP NT G+Y  GG CK CG V H  KDC
Subjt:  ICLLCRRRGHSLKNCPDKSEGTE-DKKLCYNCGQTGHSLANCPQPLQD--GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC

Q8T8R1 CCHC-type zinc finger protein CG38004.3e-1935.43Show/hide
Query:  ESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHG
        E C+ C    H A+ CPE+A+      C  C   GH  K+C        D   CY C +TGH + NCP+ + + G    +C+ CN +GH+SKNCP+ +  
Subjt:  ESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHG

Query:  IYPKGGCCKTCGEVTHLAKDCPNKGTR
               C  CG+  HL ++C  KG R
Subjt:  IYPKGGCCKTCGEVTHLAKDCPNKGTR

Q9HFF2 Uncharacterized protein C683.02c5.7e-2442.65Show/hide
Query:  QWEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKD
        Q  ++K C  CR++GH +++CP   E  ++  +C+ CG   HSL  C    + G  KFA CFIC+E+GHLS  C +N  G+YPKGGCCK C  V HLAKD
Subjt:  QWEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKD

Query:  CP--NKGT----RVSAAAGISGNRSSGYMEMPRRPA
        C   NK       V   AG +G     Y E  +  A
Subjt:  CP--NKGT----RVSAAAGISGNRSSGYMEMPRRPA

Arabidopsis top hitse value%identityAlignment
AT1G75560.1 zinc knuckle (CCHC-type) family protein5.0e-0725.43Show/hide
Query:  PKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGES-----CFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTED
        P+D   + ++ S         ++P + F +G   +  + PG    +      C  C    HIA  C  +++      C  CR  GH   NC   +EG   
Subjt:  PKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGES-----CFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTED

Query:  KKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPN
          +C++CG++GH   +C       G     C  C + GHL+ +C  +          CK C    H+A+DC N
Subjt:  KKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPN

AT1G75560.2 zinc knuckle (CCHC-type) family protein5.0e-0725.43Show/hide
Query:  PKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGES-----CFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTED
        P+D   + ++ S         ++P + F +G   +  + PG    +      C  C    HIA  C  +++      C  CR  GH   NC   +EG   
Subjt:  PKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGES-----CFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTED

Query:  KKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPN
          +C++CG++GH   +C       G     C  C + GHL+ +C  +          CK C    H+A+DC N
Subjt:  KKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPN

AT3G43590.1 zinc knuckle (CCHC-type) family protein2.7e-1331.93Show/hide
Query:  CFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIY
        CFIC + +H AK C       K   C +C++ GH  K+CPDK +      +C  CG  GH +  C         K   C+IC   GHL    P N+    
Subjt:  CFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIY

Query:  PKGGCCKTCGEVTHLAKDC
             C  CG++ H    C
Subjt:  PKGGCCKTCGEVTHLAKDC

AT4G36020.1 cold shock domain protein 17.2e-1428.83Show/hide
Query:  GESCFICKAKDHIAKFCPEKAQWEK-------NKICLLCRRRGHSLKNCPDKSEGTEDKK--------LCYNCGQTGHSLANCPQP-----LQDGGTKFA
        GE C+ C    H A+ C      ++       N  C  C   GH  ++C  KS G  D++         CY CG  GH   +C Q      ++ GG    
Subjt:  GESCFICKAKDHIAKFCPEKAQWEK-------NKICLLCRRRGHSLKNCPDKSEGTEDKK--------LCYNCGQTGHSLANCPQP-----LQDGGTKFA

Query:  NCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTRVSAAAGISGNRSSGY
         C+ C   GH++++C        P  GC + CG   HLA+DC  +G      +G  GN ++ Y
Subjt:  NCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTRVSAAAGISGNRSSGY

AT5G52380.1 VASCULAR-RELATED NAC-DOMAIN 62.3e-8958.82Show/hide
Query:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI
        MV+QR++LA+K+YKEA+PELFPKAEPTPPKDP KKKKKKS FK+ K  S            +HPLRVPGM+PGE CFIC +K HIAK CPEK++WE+NKI
Subjt:  MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKI

Query:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR
        CL CRRRGHSLKNCP+K+  + +KKLCYNCG TGHSL++CP P++DGGTKFA+CFIC   GH+SKNCP+N HGIYP GGCCK CG V HL KDCP+K  +
Subjt:  CLLCRRRGHSLKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTR

Query:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFM----------IDEDHLQINDAKPGKKKGPKVVKFL
         SA       ++S +   PR   T+  SGDDLEDDF             +D  Q +     KK+GPK+V F+
Subjt:  VSAAAGISGNRSSGYMEMPRRPATRLVSGDDLEDDFM----------IDEDHLQINDAKPGKKKGPKVVKFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGCCAGAGGCAAAAACTTGCTCGGAAAAAGTACAAAGAGGCACACCCAGAACTGTTCCCGAAAGCAGAGCCAACGCCACCAAAAGACCCGGAGAAGAAGAAGAA
AAAGAAGAGTAAATTTAAGCGCAACAAGGCAGAATCGAAAGACCCAAATAAACCCTTCAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTGCCCGGGATGCAGCCGGGAG
AAAGCTGCTTCATCTGCAAAGCCAAAGATCACATTGCCAAGTTCTGCCCAGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTGCTTTGTCGGAGACGCGGGCACAGC
CTCAAGAATTGCCCGGACAAAAGTGAAGGGACAGAGGATAAGAAGTTATGCTACAACTGTGGTCAAACAGGACATTCGCTGGCTAATTGTCCACAACCTCTTCAAGATGG
AGGAACTAAATTCGCCAATTGTTTTATTTGTAATGAAAGCGGACACTTGAGCAAGAACTGCCCGAAGAATACTCATGGTATCTACCCTAAGGGTGGTTGTTGTAAAACTT
GTGGAGAAGTTACACATTTAGCTAAAGATTGTCCAAACAAAGGCACCAGAGTTTCTGCTGCGGCTGGTATATCGGGTAACAGATCATCTGGATACATGGAAATGCCGAGA
CGACCAGCAACGAGGCTCGTGAGTGGAGACGATCTTGAGGACGACTTTATGATCGATGAAGATCATTTGCAGATCAATGATGCAAAACCAGGAAAGAAAAAGGGACCCAA
AGTTGTGAAGTTCTTGGAT
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGCCAGAGGCAAAAACTTGCTCGGAAAAAGTACAAAGAGGCACACCCAGAACTGTTCCCGAAAGCAGAGCCAACGCCACCAAAAGACCCGGAGAAGAAGAAGAA
AAAGAAGAGTAAATTTAAGCGCAACAAGGCAGAATCGAAAGACCCAAATAAACCCTTCAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTGCCCGGGATGCAGCCGGGAG
AAAGCTGCTTCATCTGCAAAGCCAAAGATCACATTGCCAAGTTCTGCCCAGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTGCTTTGTCGGAGACGCGGGCACAGC
CTCAAGAATTGCCCGGACAAAAGTGAAGGGACAGAGGATAAGAAGTTATGCTACAACTGTGGTCAAACAGGACATTCGCTGGCTAATTGTCCACAACCTCTTCAAGATGG
AGGAACTAAATTCGCCAATTGTTTTATTTGTAATGAAAGCGGACACTTGAGCAAGAACTGCCCGAAGAATACTCATGGTATCTACCCTAAGGGTGGTTGTTGTAAAACTT
GTGGAGAAGTTACACATTTAGCTAAAGATTGTCCAAACAAAGGCACCAGAGTTTCTGCTGCGGCTGGTATATCGGGTAACAGATCATCTGGATACATGGAAATGCCGAGA
CGACCAGCAACGAGGCTCGTGAGTGGAGACGATCTTGAGGACGACTTTATGATCGATGAAGATCATTTGCAGATCAATGATGCAAAACCAGGAAAGAAAAAGGGACCCAA
AGTTGTGAAGTTCTTGGAT
Protein sequenceShow/hide protein sequence
MVSQRQKLARKKYKEAHPELFPKAEPTPPKDPEKKKKKKSKFKRNKAESKDPNKPFKKGFKKHPLRVPGMQPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHS
LKNCPDKSEGTEDKKLCYNCGQTGHSLANCPQPLQDGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPNKGTRVSAAAGISGNRSSGYMEMPR
RPATRLVSGDDLEDDFMIDEDHLQINDAKPGKKKGPKVVKFLD