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MS000441 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000441
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold44:1698687..1699202
RNA-Seq ExpressionMS000441
SyntenyMS000441
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650469.1 hypothetical protein Csa_023715, partial [Cucumis sativus]3.8e-6680.84Show/hide
Query:  LVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKRRETIP
        LV+RM+ANGF+T+  S +TYATAT PRMKSYAPTADFS F H    QS+ KASRAGDFVPVYVAIGMIALSVG GLHTAKQQLAHSPSVSVRKKRRETIP
Subjt:  LVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKRRETIP

Query:  EVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        EVVEPEHVAEE EKFFAKSFFRKVAH+QE  KFGDY VPYD  LGD +AH HR+E+LKSVGIDP  N
Subjt:  EVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

XP_008439275.1 PREDICTED: uncharacterized protein LOC103484107 [Cucumis melo]1.1e-6881.98Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR
        MAL  LV+RM+ANGFRT++KS +TYATAT PRMKSYAPTADFS FDH    QS+ KASRAGDFVPVYVAIGMIALSVG GLHTAKQQLA+SPSVSVRKKR
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR

Query:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RETIPEVVEPEHVAEE EKFFAKSFFRKVAHVQE  KFGDY VPYD  LGD +AH HR+E+LKSVGIDP  N
Subjt:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

XP_011651187.1 uncharacterized protein LOC105434852 [Cucumis sativus]5.9e-6780.23Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR
        MAL  LV+RM+ANGF+T+  S +TYATAT PRMKSYAPTADFS F H    QS+ KASRAGDFVPVYVAIGMIALSVG GLHTAKQQLAHSPSVSVRKKR
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR

Query:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RETIPEVVEPEHVAEE EKFFAKSFFRKVAH+QE  KFGDY VPYD  LGD +AH HR+E+LKSVGIDP  N
Subjt:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

XP_022945500.1 uncharacterized protein LOC111449717 [Cucurbita moschata]6.5e-6678.03Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDH-HRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK
        MA   L TR++AN FRT +KS K+YATAT  RMKSYAP ADFSRFDH ++QQQS+ KASRAGDFVPVYVAIG+IALSV  GLHTAKQQLAHSPSVSVRKK
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDH-HRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK

Query:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RRETIPEV EPEHVAEE EKFFAKSFFRKVAHVQE  K  +Y VPYD  LGD +AHRHR+ETL+SVG+DP SN
Subjt:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

XP_038877441.1 uncharacterized protein LOC120069725 [Benincasa hispida]2.1e-7285.55Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFD-HHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK
        MAL  LVTR +ANGFRTA+KS +TY TATAP MKSYAP ADFSRFD HHRQQQS+ KASRAGDFVPVYVAIGMIALSVG GLHTAKQQLAHSPSVSVRKK
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFD-HHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK

Query:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RRETIPEVVEPEHVAEE EKFFAKSFFRKVAHVQE  KFGDY VPYD  LGD +AH HR+ETLKSVGIDP SN
Subjt:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

TrEMBL top hitse value%identityAlignment
A0A0A0L610 Uncharacterized protein2.8e-6780.23Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR
        MAL  LV+RM+ANGF+T+  S +TYATAT PRMKSYAPTADFS F H    QS+ KASRAGDFVPVYVAIGMIALSVG GLHTAKQQLAHSPSVSVRKKR
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR

Query:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RETIPEVVEPEHVAEE EKFFAKSFFRKVAH+QE  KFGDY VPYD  LGD +AH HR+E+LKSVGIDP  N
Subjt:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

A0A1S3AZ27 uncharacterized protein LOC1034841075.2e-6981.98Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR
        MAL  LV+RM+ANGFRT++KS +TYATAT PRMKSYAPTADFS FDH    QS+ KASRAGDFVPVYVAIGMIALSVG GLHTAKQQLA+SPSVSVRKKR
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR

Query:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RETIPEVVEPEHVAEE EKFFAKSFFRKVAHVQE  KFGDY VPYD  LGD +AH HR+E+LKSVGIDP  N
Subjt:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

A0A5D3DHE3 Uncharacterized protein5.2e-6981.98Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR
        MAL  LV+RM+ANGFRT++KS +TYATAT PRMKSYAPTADFS FDH    QS+ KASRAGDFVPVYVAIGMIALSVG GLHTAKQQLA+SPSVSVRKKR
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKR

Query:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RETIPEVVEPEHVAEE EKFFAKSFFRKVAHVQE  KFGDY VPYD  LGD +AH HR+E+LKSVGIDP  N
Subjt:  RETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

A0A6J1G139 uncharacterized protein LOC1114497173.1e-6678.03Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDH-HRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK
        MA   L TR++AN FRT +KS K+YATAT  RMKSYAP ADFSRFDH ++QQQS+ KASRAGDFVPVYVAIG+IALSV  GLHTAKQQLAHSPSVSVRKK
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDH-HRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK

Query:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RRETIPEV EPEHVAEE EKFFAKSFFRKVAHVQE  K  +Y VPYD  LGD +AHRHR+ETL+SVG+DP SN
Subjt:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

A0A6J1HUK3 uncharacterized protein LOC1114675951.6e-6577.46Show/hide
Query:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDH-HRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK
        MA   L  R++AN FRT +KS K+YATAT  RMKSYAP ADFSRFDH ++QQQS+ KASRAGDFVPVYVAIG+IALSV  GLHTAKQQLAHSPSVSVRKK
Subjt:  MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDH-HRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKK

Query:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN
        RRETIPEV EPEHVAEE EKFFAKSFFRKVAHVQE  K  +Y VPYD  LGD +AHRHR+ETL+SVG+DP SN
Subjt:  RRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G63060.1 unknown protein3.9e-1637.82Show/hide
Query:  QQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLG
        +Q+  K S  G+F PV +  G + L+V    H+ KQQL H+P++S RK RR  + EV +PE+    A+KF  KS+ RKV  +Q+ +K    ++  D    
Subjt:  QQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKRRETIPEVVEPEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLG

Query:  DVFAHRHRSETLKSVGIDP
        + F     +ETL SVG+ P
Subjt:  DVFAHRHRSETLKSVGIDP

AT5G07330.1 unknown protein4.9e-2743.75Show/hide
Query:  SANGFRTASKSAKTYATA-TAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKRRETIPEVVE
        S    +   +  +TY  A T PR K+Y+  A     ++  Q+ + T A+  GDF PVYV+IG+I+LSV FG++TA   L  +P V V KK RET+PE+ +
Subjt:  SANGFRTASKSAKTYATA-TAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKRRETIPEVVE

Query:  PEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDP
        P+ V  EA++F  +S+FRK+AHVQE   F    V  D    D FAH+ R+ TLK VG+DP
Subjt:  PEHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCAGCTCTTTGGTAACCCGAATGTCGGCCAATGGCTTCAGAACCGCAAGTAAAAGCGCTAAAACTTACGCCACGGCGACGGCGCCGAGGATGAAATCTTACGC
GCCGACGGCTGATTTCTCCCGATTTGATCACCACCGGCAGCAGCAGAGCAGGACCAAGGCGTCGCGAGCCGGCGATTTTGTCCCGGTGTATGTGGCGATCGGGATGATTG
CGCTCTCTGTAGGTTTCGGATTGCACACCGCGAAGCAACAACTGGCTCACTCTCCGTCCGTTTCCGTTCGGAAGAAGCGGAGAGAGACGATTCCGGAGGTGGTGGAGCCA
GAGCACGTGGCGGAGGAGGCCGAGAAGTTCTTCGCCAAATCGTTCTTCAGAAAAGTGGCTCATGTTCAGGAACCTGCCAAGTTTGGAGATTACAGCGTCCCTTACGATTC
TCCACTCGGCGATGTCTTCGCCCATCGCCACCGTAGCGAGACGCTCAAGTCCGTCGGAATTGATCCCGTTTCCAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCAGCTCTTTGGTAACCCGAATGTCGGCCAATGGCTTCAGAACCGCAAGTAAAAGCGCTAAAACTTACGCCACGGCGACGGCGCCGAGGATGAAATCTTACGC
GCCGACGGCTGATTTCTCCCGATTTGATCACCACCGGCAGCAGCAGAGCAGGACCAAGGCGTCGCGAGCCGGCGATTTTGTCCCGGTGTATGTGGCGATCGGGATGATTG
CGCTCTCTGTAGGTTTCGGATTGCACACCGCGAAGCAACAACTGGCTCACTCTCCGTCCGTTTCCGTTCGGAAGAAGCGGAGAGAGACGATTCCGGAGGTGGTGGAGCCA
GAGCACGTGGCGGAGGAGGCCGAGAAGTTCTTCGCCAAATCGTTCTTCAGAAAAGTGGCTCATGTTCAGGAACCTGCCAAGTTTGGAGATTACAGCGTCCCTTACGATTC
TCCACTCGGCGATGTCTTCGCCCATCGCCACCGTAGCGAGACGCTCAAGTCCGTCGGAATTGATCCCGTTTCCAAC
Protein sequenceShow/hide protein sequence
MALSSLVTRMSANGFRTASKSAKTYATATAPRMKSYAPTADFSRFDHHRQQQSRTKASRAGDFVPVYVAIGMIALSVGFGLHTAKQQLAHSPSVSVRKKRRETIPEVVEP
EHVAEEAEKFFAKSFFRKVAHVQEPAKFGDYSVPYDSPLGDVFAHRHRSETLKSVGIDPVSN