CuGenDBv2

Gene ID	MS000444
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	scaffold44:1704888..1705013
RNA-Seq Expression	MS000444
Synteny	MS000444
Gene Ontology terms	GO:0006091 - generation of precursor metabolites and energy (biological process) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016020 - membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KCW83962.1 hypothetical protein EUGRSUZ_B00847 [Eucalyptus grandis]

1.2e-05

69.05

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLEIMIF
        KEGDSLA YLVR+GEM ESIKLFN+LW+    P ENLE   F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLEIMIF

QXI84922.1 NADH-plastoquinone oxidoreductase subunit 7 [Crawfurdia poilanei]

5.0e-04

62.79

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTES+K+  Q+ +     PCENLEI  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

QXI85246.1 NADH-plastoquinone oxidoreductase subunit 7 [Sinogentiana striata]

5.0e-04

62.79

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTES+K+  Q+ +     PCENLEI  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

VVW84306.1 unnamed protein product, partial [Nymphaea colorata]

5.2e-09

84.21

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLE
        KEGDSLA YLVR+GEMTESIKLFN+LWK+FR P ENLE
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLE

YP_009972280.1 NADH dehydrogenase subunit H [Tripterospermum membranaceum]

5.0e-04

62.79

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTES+K+  Q+ +     PCENLEI  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

TrEMBL top hits

e value

%identity

Alignment

A0A059D064 Uncharacterized protein

5.8e-06

69.05

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLEIMIF
        KEGDSLA YLVR+GEM ESIKLFN+LW+    P ENLE   F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLEIMIF

A0A191VR29 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.4e-04

62.79

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTESIK+  Q  +     PCENLE+  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

A0A411PVG2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

3.2e-04

62.79

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTESIK+  Q  +     PCENLE+  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

A0A5K1H9A3 Complex1_49kDa domain-containing protein (Fragment)

2.5e-09

84.21

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLE
        KEGDSLA YLVR+GEMTESIKLFN+LWK+FR P ENLE
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLE

A0A7G7WUP9 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.4e-04

62.79

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTES+K+  Q+ +     PCENLEI  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

SwissProt top hits

e value

%identity

Alignment

A6MMQ7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.8e-05

60.47

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTESIK+  Q  +     P ENLE+  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

A6MN01 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.1e-05

60.47

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTESIK+  Q  +     P ENLE+  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

Q09MC0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.2e-05

60.47

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTES+K+  Q  +     P ENLEI  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

9.5e-06

62.79

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        KEGDSLA YLVR+GEMTESIK+  Q  +     P ENLEI  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

Q8S8U4 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

3.6e-05

60.47

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF
        +EGDSLA YLVR+GEMTESIK+  Q  +     P ENLEI  F
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLEIMIF

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

2.8e-05

61.54

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Query:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLE
        K+GDSLA YLVRL EMTESIK+  Q  +     P ENLE
Subjt:  KEGDSLACYLVRLGEMTESIKLFNQLWKDF-RRPCENLE

Sequences

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CDS sequence

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AAAGAAGGAGATTCATTAGCTTGTTATTTAGTCAGACTTGGTGAGATGACAGAATCCATAAAATTATTCAACCAGCTTTGGAAGGATTTCAGGAGGCCTTGTGAGAATTT
AGAAATCATGATTTTT

mRNA sequence

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AAAGAAGGAGATTCATTAGCTTGTTATTTAGTCAGACTTGGTGAGATGACAGAATCCATAAAATTATTCAACCAGCTTTGGAAGGATTTCAGGAGGCCTTGTGAGAATTT
AGAAATCATGATTTTT

Protein sequence

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KEGDSLACYLVRLGEMTESIKLFNQLWKDFRRPCENLEIMIF

MS000444 (gene) of Bitter gourd (TR) v1 genome