; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000448 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000448
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold44:1725837..1727759
RNA-Seq ExpressionMS000448
SyntenyMS000448
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140747.2 pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus]1.6e-14082.13Show/hide
Query:  FLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
        FL   RMLTL+Y+FPV SKRIESV FSW  SS+VVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
Subjt:  FLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA

Query:  LKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNT
        LKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LES+PR+FFHKMISLYYDQ MHDKLFEVFADMEELGVQPN 
Subjt:  LKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNT

Query:  EIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLE-DEEMREDPDEILED
         IVT +GNVFQELGM DKY+KL KKYPP KWEYRY+KGKRV+IRAKYL+E GNSNNG SE  + + SS   ++EAE  S+DSSLE DE+M EDPDEILED
Subjt:  EIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLE-DEEMREDPDEILED

Query:  ESKLEAPDFEYNFMGYGRL
        E      +FE++FMG G+L
Subjt:  ESKLEAPDFEYNFMGYGRL

XP_016899030.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cucumis melo]4.3e-14680.71Show/hide
Query:  LLKMEIWNSIYRKLLIFVFLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGAL
        LL++EI  SI+R LLIF  +CW RMLTL+Y+FPV SKRIESV FSW  SS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGAL
Subjt:  LLKMEIWNSIYRKLLIFVFLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGAL

Query:  DSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHD
        DSFIAWELEFPLITVKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQYLESMPR+FFHKMISLYYD+ MHD
Subjt:  DSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHD

Query:  KLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDS
        KLFEVFADMEELGVQPN  IVT +GN+FQELGM DKYEKL KKYPP KWEYRY+KGKRV+IR KYL+E GNS NG SE ++ + SS   L+EAE  S+DS
Subjt:  KLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDS

Query:  SLE-DEEMREDPDEILEDESKLEAPDFEYNFMGYGRL
        SLE DEE+ +DPDEILEDE      +FE++FMG G+L
Subjt:  SLE-DEEMREDPDEILEDESKLEAPDFEYNFMGYGRL

XP_022140817.1 pentatricopeptide repeat-containing protein At4g21190 [Momordica charantia]1.0e-17199.68Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RM TLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM
        IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM
Subjt:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM

Query:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEA
        IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEA
Subjt:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEA

Query:  PDFEYNFMGYGRL
        PDFEYNFMGYGRL
Subjt:  PDFEYNFMGYGRL

XP_038888232.1 pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Benincasa hispida]3.2e-14183.12Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RMLTLIYSFPVISKRIESV FSW ASS+VVCAAKGPRPRYPRVWKT+KRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM
         QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYD+ MHDKLFEVFADMEELGVQPN EIVTM
Subjt:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM

Query:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDE-EMREDPDEILEDESKLE
        +GNVF ELGM DKYEKL KKYPP KWEYRY+KGKRVRIR+KYL E GN NN  S+ D+ + SS KLLEEAE  S+D++LED+ EM EDP+EI +DE   +
Subjt:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDE-EMREDPDEILEDESKLE

Query:  APDFEYNFMGYGRL
          +FE++FMG+G+L
Subjt:  APDFEYNFMGYGRL

XP_038888233.1 pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Benincasa hispida]1.6e-14083.07Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEI
        MLTLIYSFPVISKRIESV FSW ASS+VVCAAKGPRPRYPRVWKT+KRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLE 
Subjt:  MLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEI

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMI
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYD+ MHDKLFEVFADMEELGVQPN EIVTM+
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMI

Query:  GNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDE-EMREDPDEILEDESKLEA
        GNVF ELGM DKYEKL KKYPP KWEYRY+KGKRVRIR+KYL E GN NN  S+ D+ + SS KLLEEAE  S+D++LED+ EM EDP+EI +DE   + 
Subjt:  GNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDE-EMREDPDEILEDESKLEA

Query:  PDFEYNFMGYGRL
         +FE++FMG+G+L
Subjt:  PDFEYNFMGYGRL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein7.6e-14182.13Show/hide
Query:  FLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
        FL   RMLTL+Y+FPV SKRIESV FSW  SS+VVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
Subjt:  FLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA

Query:  LKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNT
        LKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LES+PR+FFHKMISLYYDQ MHDKLFEVFADMEELGVQPN 
Subjt:  LKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNT

Query:  EIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLE-DEEMREDPDEILED
         IVT +GNVFQELGM DKY+KL KKYPP KWEYRY+KGKRV+IRAKYL+E GNSNNG SE  + + SS   ++EAE  S+DSSLE DE+M EDPDEILED
Subjt:  EIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLE-DEEMREDPDEILED

Query:  ESKLEAPDFEYNFMGYGRL
        E      +FE++FMG G+L
Subjt:  ESKLEAPDFEYNFMGYGRL

A0A1S4DTK8 pentatricopeptide repeat-containing protein At4g21190 isoform X12.1e-14680.71Show/hide
Query:  LLKMEIWNSIYRKLLIFVFLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGAL
        LL++EI  SI+R LLIF  +CW RMLTL+Y+FPV SKRIESV FSW  SS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGAL
Subjt:  LLKMEIWNSIYRKLLIFVFLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGAL

Query:  DSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHD
        DSFIAWELEFPLITVKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQYLESMPR+FFHKMISLYYD+ MHD
Subjt:  DSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHD

Query:  KLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDS
        KLFEVFADMEELGVQPN  IVT +GN+FQELGM DKYEKL KKYPP KWEYRY+KGKRV+IR KYL+E GNS NG SE ++ + SS   L+EAE  S+DS
Subjt:  KLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDS

Query:  SLE-DEEMREDPDEILEDESKLEAPDFEYNFMGYGRL
        SLE DEE+ +DPDEILEDE      +FE++FMG G+L
Subjt:  SLE-DEEMREDPDEILEDESKLEAPDFEYNFMGYGRL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein2.9e-14082.48Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RMLTL+Y+FPV SKRIESV FSW  SS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM
         QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQYLESMPR+FFHKMISLYYD+ MHDKLFEVFADMEELGVQPN  IVT 
Subjt:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM

Query:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLE-DEEMREDPDEILEDESKLE
        +GN+FQELGM DKYEKL KKYPP KWEYRY+KGKRV+IR KYL+E GNS NG SE ++ + SS   L+EAE  S+DSSLE DEE+ +DPDEILEDE    
Subjt:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLE-DEEMREDPDEILEDESKLE

Query:  APDFEYNFMGYGRL
          +FE++FMG G+L
Subjt:  APDFEYNFMGYGRL

A0A6J1CI57 pentatricopeptide repeat-containing protein At4g211904.9e-17299.68Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RM TLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM
        IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM
Subjt:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM

Query:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEA
        IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEA
Subjt:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEA

Query:  PDFEYNFMGYGRL
        PDFEYNFMGYGRL
Subjt:  PDFEYNFMGYGRL

A0A6J1G1Y3 pentatricopeptide repeat-containing protein At4g211902.2e-14083.81Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RM TLIYSFPVISK IESVKFS  ASS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM
        IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALA DGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYY++ MHDKLFE+FADMEELGVQP+  IVT 
Subjt:  IQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTM

Query:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSI-KLLEEAETVSKDSSLEDEEMREDPDEILEDES-KL
        +GNVFQ+LGM DKYEKLKKKYPP KWEYRY++GKRV+IRAK L+E G+SNNGS ELD+K+ SS  +LLEE E  S+DSSLED+EM EDPDE LEDES  L
Subjt:  IGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSI-KLLEEAETVSKDSSLEDEEMREDPDEILEDES-KL

Query:  EAPDFEYNFMGYGRL
        +   FE++FMG+G+L
Subjt:  EAPDFEYNFMGYGRL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.4e-4345.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

Q8LG95 Pentatricopeptide repeat-containing protein At4g211901.5e-9862.95Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV
        LE ++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY + MH KLFEVFADMEELGV+PN  IV
Subjt:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV

Query:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK
        +M+G VF +L M DKYEKL KKYPP +WE+RY+KG+RV+++AK LNE      G S  + K D+ I+  EE  E +S++   E E +     +I   E  
Subjt:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK

Query:  LEAPD
        L+  D
Subjt:  LEAPD

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein1.7e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein1.7e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein1.7e-4445.32Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI+LY    +HDK+ EVFADMEEL V P+ +    +   F+EL   +  + + ++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIVTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKY

Query:  LNE
         +E
Subjt:  LNE

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-9962.95Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV
        LE ++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF ++LE  PR FF+KMIS+YY + MH KLFEVFADMEELGV+PN  IV
Subjt:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEIV

Query:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK
        +M+G VF +L M DKYEKL KKYPP +WE+RY+KG+RV+++AK LNE      G S  + K D+ I+  EE  E +S++   E E +     +I   E  
Subjt:  TMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEE-AETVSKDSSLEDEEMREDPDEILEDESK

Query:  LEAPD
        L+  D
Subjt:  LEAPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCTAAAGATGGAGATTTGGAATTCAATTTATCGAAAACTATTGATATTTGTTTTCCTTTGCTGGCTCAGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAA
AAGGATAGAATCTGTTAAATTTTCCTGGAGTGCAAGCAGTACAGTGGTATGCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCCGAAAGAGAATTG
GAACCATATCCAAGGCAGCAAAGCTTGTTGATTGTGTCAAGGGACTGTCTAACGTCAAAGAGGAAGTTTATGGGGCTCTTGATTCCTTCATAGCCTGGGAACTAGAGTTT
CCTCTTATTACTGTAAAGAAGGCCCTGAAGACCTTAGAGATTCAAAGAGAATGGAAGAGGATAATCCAGTTGACAAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAAT
GGGAAGCTATTTCACATTACTAAATGCCTTAGCTGAAGATGGAAGACTCGATGAAGCCGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATCTGGAGAGCATGCCTAGGA
TGTTCTTTCATAAAATGATATCCCTCTATTATGACCAGGGCATGCACGACAAGTTATTCGAGGTATTTGCTGACATGGAAGAACTTGGAGTTCAACCAAATACGGAAATT
GTCACTATGATAGGAAATGTCTTCCAAGAGTTGGGTATGTTTGATAAATATGAAAAGCTGAAGAAGAAATATCCTCCACTAAAATGGGAGTATCGATACGTTAAAGGAAA
GCGTGTAAGAATACGAGCGAAGTACCTGAACGAATATGGTAATTCCAACAATGGTTCAAGTGAGCTGGACCAAAAAGATGACAGTTCAATCAAACTACTGGAGGAAGCTG
AAACAGTTTCTAAGGATTCTAGTCTTGAAGATGAGGAAATGAGGGAAGACCCAGATGAAATATTGGAAGATGAAAGTAAGTTGGAGGCACCCGATTTTGAATACAATTTC
ATGGGGTATGGGCGATTG
mRNA sequenceShow/hide mRNA sequence
CTTCTAAAGATGGAGATTTGGAATTCAATTTATCGAAAACTATTGATATTTGTTTTCCTTTGCTGGCTCAGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAA
AAGGATAGAATCTGTTAAATTTTCCTGGAGTGCAAGCAGTACAGTGGTATGCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGGTTTGGAAAACCCGAAAGAGAATTG
GAACCATATCCAAGGCAGCAAAGCTTGTTGATTGTGTCAAGGGACTGTCTAACGTCAAAGAGGAAGTTTATGGGGCTCTTGATTCCTTCATAGCCTGGGAACTAGAGTTT
CCTCTTATTACTGTAAAGAAGGCCCTGAAGACCTTAGAGATTCAAAGAGAATGGAAGAGGATAATCCAGTTGACAAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAAT
GGGAAGCTATTTCACATTACTAAATGCCTTAGCTGAAGATGGAAGACTCGATGAAGCCGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATCTGGAGAGCATGCCTAGGA
TGTTCTTTCATAAAATGATATCCCTCTATTATGACCAGGGCATGCACGACAAGTTATTCGAGGTATTTGCTGACATGGAAGAACTTGGAGTTCAACCAAATACGGAAATT
GTCACTATGATAGGAAATGTCTTCCAAGAGTTGGGTATGTTTGATAAATATGAAAAGCTGAAGAAGAAATATCCTCCACTAAAATGGGAGTATCGATACGTTAAAGGAAA
GCGTGTAAGAATACGAGCGAAGTACCTGAACGAATATGGTAATTCCAACAATGGTTCAAGTGAGCTGGACCAAAAAGATGACAGTTCAATCAAACTACTGGAGGAAGCTG
AAACAGTTTCTAAGGATTCTAGTCTTGAAGATGAGGAAATGAGGGAAGACCCAGATGAAATATTGGAAGATGAAAGTAAGTTGGAGGCACCCGATTTTGAATACAATTTC
ATGGGGTATGGGCGATTG
Protein sequenceShow/hide protein sequence
LLKMEIWNSIYRKLLIFVFLCWLRMLTLIYSFPVISKRIESVKFSWSASSTVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEF
PLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRMFFHKMISLYYDQGMHDKLFEVFADMEELGVQPNTEI
VTMIGNVFQELGMFDKYEKLKKKYPPLKWEYRYVKGKRVRIRAKYLNEYGNSNNGSSELDQKDDSSIKLLEEAETVSKDSSLEDEEMREDPDEILEDESKLEAPDFEYNF
MGYGRL