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MS000464 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000464
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLipoyl(octanoyl) transferase
Genome locationscaffold44:1891427..1891516
RNA-Seq ExpressionMS000464
SyntenyMS000464
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0009249 - protein lipoylation (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030677 - ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0033819 - lipoyl(octanoyl) transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0102555 - octanoyl transferase activity (acting on glycine-cleavage complex H protein) (molecular function)
InterPro domainsIPR004143 - Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KVI00265.1 Biotin/lipoate A/B protein ligase [Cynara cardunculus var. scolymus]1.6e-0477.14Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRIS GITSHGLAFN+DP LRY
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
XP_022154074.1 octanoyltransferase [Momordica charantia]2.7e-0477.14Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRISGGITSHGLAFN+DP L Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
XP_022641414.1 octanoyltransferase isoform X3 [Vigna radiata var. radiata]2.7e-0474.29Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRISGGITSHG+AFN+DP L Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
XP_024983286.1 octanoyltransferase-like [Cynara cardunculus var. scolymus]1.6e-0477.14Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRIS GITSHGLAFN+DP LRY
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
XP_038879976.1 octanoyltransferase LIP2, mitochondrial [Benincasa hispida]1.2e-0480Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRIS GITSHGLAFNVDP LRY
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
TrEMBL top hitse value%identityAlignment
A0A0L9U0B9 Lipoyl(octanoyl) transferase1.3e-0474.29Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRISGGITSHG+AFN+DP L Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
A0A103Y0H2 Selenoprotein O7.8e-0577.14Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRIS GITSHGLAFN+DP LRY
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
A0A1S3UY81 Lipoyl(octanoyl) transferase1.3e-0474.29Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRISGGITSHG+AFN+DP L Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
A0A3Q0FFK4 Lipoyl(octanoyl) transferase1.3e-0474.29Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRISGGITSHG+AFN+DP L Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
A0A3Q0FGE6 Lipoyl(octanoyl) transferase1.3e-0474.29Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRISGGITSHG+AFN+DP L Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
SwissProt top hitse value%identityAlignment
Q9SXP7 Octanoyltransferase LIP2, mitochondrial4.0e-0668.57Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRIS GITSHGLA N+DP ++Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
Arabidopsis top hitse value%identityAlignment
AT1G04640.1 lipoyltransferase 22.8e-0768.57Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRIS GITSHGLA N+DP ++Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
AT1G04640.2 lipoyltransferase 22.8e-0768.57Show/hide
Query:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY
        GVWV     GAIGVRIS GITSHGLA N+DP ++Y
Subjt:  GVWV-----GAIGVRISGGITSHGLAFNVDPHLRY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGTTTGGGTTGGAGCCATTGGTGTTAGAATTTCAGGTGGGATCACTTCTCATGGTCTGGCTTTCAATGTGGATCCTCATTTGAGGTAT
mRNA sequenceShow/hide mRNA sequence
GGAGTTTGGGTTGGAGCCATTGGTGTTAGAATTTCAGGTGGGATCACTTCTCATGGTCTGGCTTTCAATGTGGATCCTCATTTGAGGTAT
Protein sequenceShow/hide protein sequence
GVWVGAIGVRISGGITSHGLAFNVDPHLRY