| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6576664.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 3.4e-40 | 64.96 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+G+FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| KAG7014714.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma] | 3.4e-40 | 64.96 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+G+FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| XP_022141097.1 pentatricopeptide repeat-containing protein At3g49170, chloroplastic [Momordica charantia] | 6.9e-41 | 67.88 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R S A+Y+SV D+IFGF IKSG+FAS+VCVGCALIDM+ K RGDLVSAFKVFEKMP R A+TWTLM+T +M+FG EA+NLFLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
ILSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| XP_022922533.1 pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X1 [Cucurbita moschata] | 3.4e-40 | 64.96 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+G+FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| XP_022922534.1 pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X2 [Cucurbita moschata] | 3.4e-40 | 64.96 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+G+FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CIW7 pentatricopeptide repeat-containing protein At3g49170, chloroplastic | 3.4e-41 | 67.88 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R S A+Y+SV D+IFGF IKSG+FAS+VCVGCALIDM+ K RGDLVSAFKVFEKMP R A+TWTLM+T +M+FG EA+NLFLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
ILSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| A0A6J1E3N3 pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X2 | 1.7e-40 | 64.96 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+G+FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| A0A6J1E6W5 pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X1 | 1.7e-40 | 64.96 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+G+FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| A0A6J1J7R2 pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X2 | 1.4e-39 | 64.23 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+ +FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| A0A6J1JAX9 pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X1 | 1.4e-39 | 64.23 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
R CS+A++ASV D+IFG+ IK+ +FAS+VCVGC LIDMF K RGDLVSAF+VFEKMP R A+TWTLM+T FM+FG EA+++FLDMIL+G EPDR
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLE--
Query: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
+LSL QQLHSQAI GLTLD CVGCCL
Subjt: ---------TILSLEQQLHSQAICDGLTLDCCVGCCL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8MQA3 Pentatricopeptide repeat-containing protein At4g21065 | 7.3e-09 | 38.71 | Show/hide |
Query: VSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILSL
+ +TI I+SG F S + V +L+ ++A + GD+ SA+KVF+KMP + + W ++ F + G PEEA+ L+ +M G +PD TI+SL
Subjt: VSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILSL
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| P0C8Q2 Pentatricopeptide repeat-containing protein At4g19191, mitochondrial | 1.6e-08 | 37.14 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETI
+ C+ + + IKS F+ S+V VG A +DMF K + A KVFE+MP R A TW M++ F + G+ ++A +LF +M LN PD + T+
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETI
Query: LSLEQ
++L Q
Subjt: LSLEQ
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| Q5G1T1 Pentatricopeptide repeat-containing protein At3g49170, chloroplastic | 4.0e-23 | 45.26 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
R CS++ + V GF +K+G F S+VCVGC+LIDMF K +A+KVF+KM +TWTLM+T M+ G P EA+ FLDM+L+G E D+ L
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
Query: TI---------LSLEQQLHSQAICDGLTLDCCVGCCL
++ LSL +QLHS AI GL D V C L
Subjt: TI---------LSLEQQLHSQAICDGLTLDCCVGCCL
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| Q7Y211 Pentatricopeptide repeat-containing protein At3g57430, chloroplastic | 1.2e-08 | 31.03 | Show/hide |
Query: CSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILS
C++ + I + IK+ A++V VG AL+DM+AK G L + KVF+++P + ITW +++ + GN +EA++L M++ G +P+ + I
Subjt: CSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILS
Query: LEQQLHSQAICDGLTL
HS + +GL +
Subjt: LEQQLHSQAICDGLTL
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| Q9FM64 Pentatricopeptide repeat-containing protein At5g55740, chloroplastic | 2.9e-10 | 33.58 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
+ C + K++ + G+ +KSG V V +L DM+ K G L A KVF+++P R A+ W ++ +++ G EEA+ LF DM G EP R +
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
Query: TILSLE---------QQLHSQAICDGLTLDCCVGCCL
T LS +Q H+ AI +G+ LD +G L
Subjt: TILSLE---------QQLHSQAICDGLTLDCCVGCCL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 2.8e-24 | 45.26 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
R CS++ + V GF +K+G F S+VCVGC+LIDMF K +A+KVF+KM +TWTLM+T M+ G P EA+ FLDM+L+G E D+ L
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
Query: TI---------LSLEQQLHSQAICDGLTLDCCVGCCL
++ LSL +QLHS AI GL D V C L
Subjt: TI---------LSLEQQLHSQAICDGLTLDCCVGCCL
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| AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 8.8e-10 | 31.03 | Show/hide |
Query: CSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILS
C++ + I + IK+ A++V VG AL+DM+AK G L + KVF+++P + ITW +++ + GN +EA++L M++ G +P+ + I
Subjt: CSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILS
Query: LEQQLHSQAICDGLTL
HS + +GL +
Subjt: LEQQLHSQAICDGLTL
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| AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 5.2e-10 | 38.71 | Show/hide |
Query: VSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILSL
+ +TI I+SG F S + V +L+ ++A + GD+ SA+KVF+KMP + + W ++ F + G PEEA+ L+ +M G +PD TI+SL
Subjt: VSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILSL
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| AT4G21065.2 Tetratricopeptide repeat (TPR)-like superfamily protein | 5.2e-10 | 38.71 | Show/hide |
Query: VSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILSL
+ +TI I+SG F S + V +L+ ++A + GD+ SA+KVF+KMP + + W ++ F + G PEEA+ L+ +M G +PD TI+SL
Subjt: VSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDRLETILSL
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| AT5G55740.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 2.1e-11 | 33.58 | Show/hide |
Query: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
+ C + K++ + G+ +KSG V V +L DM+ K G L A KVF+++P R A+ W ++ +++ G EEA+ LF DM G EP R +
Subjt: RVCSSAKYASVSDTIFGFTIKSGFFASNVCVGCALIDMFAKDRGDLVSAFKVFEKMPGRIAITWTLMVTWFMKFGNPEEAVNLFLDMILNGKEPDR--LE
Query: TILSLE---------QQLHSQAICDGLTLDCCVGCCL
T LS +Q H+ AI +G+ LD +G L
Subjt: TILSLE---------QQLHSQAICDGLTLDCCVGCCL
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