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MS000506 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000506
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationscaffold44:2143024..2143573
RNA-Seq ExpressionMS000506
SyntenyMS000506
Gene Ontology termsNA
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]2.9e-3495.35Show/hide
Query:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLDL
        W   C DFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLDL
Subjt:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLDL
XP_022923038.1 uncharacterized protein LOC111430837 [Cucurbita moschata]8.7e-3189.16Show/hide
Query:  TLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        +LC DFEVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+H EAVEARFLRASFSAFVDVLTLATKTIEDFG+G+D
Subjt:  TLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
XP_023541073.1 uncharacterized protein LOC111801345 isoform X2 [Cucurbita pepo subsp. pepo]1.9e-3092.41Show/hide
Query:  DFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        DFEVD ESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLRAS+SAF+DVLTLA KTIEDFGQGLD
Subjt:  DFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]1.0e-3189.41Show/hide
Query:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        W   C DFEVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+HFEAVEARFLRASFSAFVDVLTLATKTIEDFGQG+D
Subjt:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]1.5e-3087.06Show/hide
Query:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        W   C DFEVDYESEKKASIVYNAL VDKELQPDKVKR M+VSDGKLS+HFEAVEARFLRASFSAFVDVLTLATKT+EDFGQ +D
Subjt:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
TrEMBL top hitse value%identityAlignment
A0A6J1CHJ5 uncharacterized protein LOC1110115641.4e-3495.35Show/hide
Query:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLDL
        W   C DFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLDL
Subjt:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLDL
A0A6J1E8H0 uncharacterized protein LOC1114308374.2e-3189.16Show/hide
Query:  TLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        +LC DFEVDYESEKKASIVY AL VDKELQPDKVKREM VSDGKLS+H EAVEARFLRASFSAFVDVLTLATKTIEDFG+G+D
Subjt:  TLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
A0A6J1G2C3 uncharacterized protein LOC1114500289.4e-3188.24Show/hide
Query:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        W   C DFEVD ESEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLRAS+SAF+DVLTLA KTIEDFGQGLD
Subjt:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
A0A6J1HSW7 uncharacterized protein LOC111467483 isoform X12.3e-2991.14Show/hide
Query:  DFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        DFEVD ESEKKASIVYNAL VDKELQPDKVKR M VSDGKLSVHFEAVEARFLRAS SAF+DVLTLA KTIEDFGQGLD
Subjt:  DFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
A0A6J1HX84 uncharacterized protein LOC111467483 isoform X22.3e-2987.06Show/hide
Query:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
        W   C DFEVD ESEKKASIVYNAL VDKELQPDKVKR M VSDGKLSVHFEAVEARFLRAS SAF+DVLTLA KTIEDFGQGLD
Subjt:  WFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein2.0e-2567.44Show/hide
Query:  STRIWFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQ
        S + W   C + +V +ESE+ A I Y +LAVDKELQPDKV+R M+VS+ KLSVHFEA+EAR LRASFSAFVDVLTLAT+TI++FGQ
Subjt:  STRIWFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGCTATCTTATCATCTCTTTTAGTTTCAACTCGAATCTGGTTTACTCTCTGCAGTGACTTTGAAGTCGATTATGAGTCTGAGAAGAAAGCATCGATTGTCTATAATGC
TCTAGCTGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGGCAGTTTCTGATGGAAAACTTTCAGTACACTTTGAAGCAGTGGAAGCAAGATTTCTGCGTG
CATCATTCAGTGCTTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATCGAGGATTTCGGACAAGGATTGGACTTG
mRNA sequenceShow/hide mRNA sequence
TTAGCTATCTTATCATCTCTTTTAGTTTCAACTCGAATCTGGTTTACTCTCTGCAGTGACTTTGAAGTCGATTATGAGTCTGAGAAGAAAGCATCGATTGTCTATAATGC
TCTAGCTGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGAGATGGCAGTTTCTGATGGAAAACTTTCAGTACACTTTGAAGCAGTGGAAGCAAGATTTCTGCGTG
CATCATTCAGTGCTTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATCGAGGATTTCGGACAAGGATTGGACTTG
Protein sequenceShow/hide protein sequence
LAILSSLLVSTRIWFTLCSDFEVDYESEKKASIVYNALAVDKELQPDKVKREMAVSDGKLSVHFEAVEARFLRASFSAFVDVLTLATKTIEDFGQGLDL