; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000514 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000514
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondof zinc finger protein DOF3.7-like
Genome locationscaffold44:2177491..2177760
RNA-Seq ExpressionMS000514
SyntenyMS000514
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576640.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3078.49Show/hide
Query:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS
        V  +SME E  EEG++A LERK      ++LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR P+PNF S
Subjt:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS

XP_004146271.1 dof zinc finger protein DOF1.8 [Cucumis sativus]3.6e-3181.93Show/hide
Query:  ESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS
        E +EEG +AV+ERK      ++LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP+ NFS
Subjt:  ESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS

XP_022140886.1 dof zinc finger protein DOF3.7-like [Momordica charantia]1.8e-4398.89Show/hide
Query:  QVVAKRSMEEESDEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        QVVAKRSMEEES+EEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
Subjt:  QVVAKRSMEEESDEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

XP_022984510.1 dof zinc finger protein DOF5.7-like [Cucurbita maxima]1.3e-3079.57Show/hide
Query:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS
        V  +SME E  EEG+RA LERK      ++LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR P+PNF S
Subjt:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS

XP_038895823.1 dof zinc finger protein DOF4.6-like [Benincasa hispida]7.9e-3180.95Show/hide
Query:  ESDEEGKRAVLERK----LAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        E +EEG +AV+ERK      ++LNCPRCNSNNTKFCYYNNYSL+QPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP+ NFSS
Subjt:  ESDEEGKRAVLERK----LAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

TrEMBL top hitse value%identityAlignment
A0A0A0L9J3 Dof-type domain-containing protein1.7e-3181.93Show/hide
Query:  ESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS
        E +EEG +AV+ERK      ++LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP+ NFS
Subjt:  ESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS

A0A1S3C3F2 dof zinc finger protein DOF1.8-like1.1e-3076.92Show/hide
Query:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS
        V  ++M+ E +EEG +AV+ERK      ++LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP+ NFS
Subjt:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS

A0A5D3CLI1 Dof zinc finger protein DOF1.8-like1.1e-3076.92Show/hide
Query:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS
        V  ++M+ E +EEG +AV+ERK      ++LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRP+ NFS
Subjt:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFS

A0A6J1CHD6 dof zinc finger protein DOF3.7-like8.8e-4498.89Show/hide
Query:  QVVAKRSMEEESDEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        QVVAKRSMEEES+EEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
Subjt:  QVVAKRSMEEESDEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

A0A6J1J8T6 dof zinc finger protein DOF5.7-like6.5e-3179.57Show/hide
Query:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS
        V  +SME E  EEG+RA LERK      ++LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR P+PNF S
Subjt:  VAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS

SwissProt top hitse value%identityAlignment
B9F1L8 Dof zinc finger protein 26.1e-2687.72Show/hide
Query:  KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR
        K LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN+PVGG SRKNKR
Subjt:  KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR

Q84JQ8 Dof zinc finger protein DOF1.85.5e-2761.7Show/hide
Query:  QVVAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        ++V    ++++S+       +ERK      + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR + N SS
Subjt:  QVVAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

Q9M161 Dof zinc finger protein DOF4.11.8e-2567.09Show/hide
Query:  DEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS
        DE+     +  +  +  NCPRCNS+NTKFCYYNNYSL+QPRY CKSCRRYWT GGSLRN+PVGG SRKNK+ P PN S+
Subjt:  DEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS

Q9SXG8 Dof zinc finger protein 13.6e-2679.69Show/hide
Query:  KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        K LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN+PVGG SRKNKR + + +S
Subjt:  KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

Q9ZPY0 Dof zinc finger protein DOF2.52.7e-2675.34Show/hide
Query:  VLERKL--AKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        V ERK    + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKNKR + + SS
Subjt:  VLERKL--AKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

Arabidopsis top hitse value%identityAlignment
AT1G64620.1 Dof-type zinc finger DNA-binding family protein3.9e-2861.7Show/hide
Query:  QVVAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        ++V    ++++S+       +ERK      + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR + N SS
Subjt:  QVVAKRSMEEESDEEGKRAVLERKLA----KVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

AT2G46590.1 Dof-type zinc finger DNA-binding family protein1.9e-2775.34Show/hide
Query:  VLERKL--AKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        V ERK    + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKNKR + + SS
Subjt:  VLERKL--AKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

AT2G46590.2 Dof-type zinc finger DNA-binding family protein1.9e-2775.34Show/hide
Query:  VLERKL--AKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        V ERK    + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKNKR + + SS
Subjt:  VLERKL--AKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

AT3G61850.1 Dof-type zinc finger DNA-binding family protein2.1e-2679.03Show/hide
Query:  LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS
        +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKNKR +   +S
Subjt:  LNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS

AT4G00940.1 Dof-type zinc finger DNA-binding family protein1.3e-2667.09Show/hide
Query:  DEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS
        DE+     +  +  +  NCPRCNS+NTKFCYYNNYSL+QPRY CKSCRRYWT GGSLRN+PVGG SRKNK+ P PN S+
Subjt:  DEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PAPNFSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTTGTGGCCAAAAGAAGCATGGAGGAGGAGTCAGATGAAGAGGGGAAAAGGGCAGTTTTGGAAAGAAAATTAGCAAAGGTTTTAAACTGCCCAAGATGCAACTCCAA
CAACACAAAGTTCTGCTATTACAACAATTACAGCCTGTCTCAGCCAAGATACTTCTGCAAGTCTTGTAGGAGATATTGGACAGCTGGTGGGTCTCTCAGAAATATTCCAG
TGGGTGGTGCCTCCAGGAAGAACAAAAGGCCTGCACCTAATTTCTCATCA
mRNA sequenceShow/hide mRNA sequence
CAGGTTGTGGCCAAAAGAAGCATGGAGGAGGAGTCAGATGAAGAGGGGAAAAGGGCAGTTTTGGAAAGAAAATTAGCAAAGGTTTTAAACTGCCCAAGATGCAACTCCAA
CAACACAAAGTTCTGCTATTACAACAATTACAGCCTGTCTCAGCCAAGATACTTCTGCAAGTCTTGTAGGAGATATTGGACAGCTGGTGGGTCTCTCAGAAATATTCCAG
TGGGTGGTGCCTCCAGGAAGAACAAAAGGCCTGCACCTAATTTCTCATCA
Protein sequenceShow/hide protein sequence
QVVAKRSMEEESDEEGKRAVLERKLAKVLNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPAPNFSS