; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000526 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000526
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold64:3943..5515
RNA-Seq ExpressionMS000526
SyntenyMS000526
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139075.1 chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus]8.2e-14894.14Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR R GARPSFGSSRKSASFVVRAEATPPVKQGA+RQLWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_008450298.1 PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo]7.7e-14692.67Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR R GA+PSFGSSRKSASFVVRA ATPPVKQGA+RQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022153224.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Momordica charantia]5.3e-155100Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022960627.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic-like [Cucurbita moschata]1.3e-14593.04Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR RFG +P  GSS K ASFVVRAEATPPVKQGANR LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLE+FLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+KDLKLKEVKNGRLAMLAILG F+QGLVTGVGPYQNLLDHLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_038879830.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida]1.7e-14895.24Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR R GA+PSFGSSRK+ASFVVRAEATPPVKQGA+RQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILG+FVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

TrEMBL top hitse value%identityAlignment
A0A0A0LXV0 Chlorophyll a-b binding protein, chloroplastic4.0e-14894.14Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR R GARPSFGSSRKSASFVVRAEATPPVKQGA+RQLWFASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A1S3BPK7 Chlorophyll a-b binding protein, chloroplastic3.7e-14692.67Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR R GA+PSFGSSRKSASFVVRA ATPPVKQGA+RQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A5D3DX73 Chlorophyll a-b binding protein, chloroplastic3.7e-14692.67Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR R GA+PSFGSSRKSASFVVRA ATPPVKQGA+RQLWFASKQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLG  GAIAPEI GSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEKFLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+QGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1DIF2 Chlorophyll a-b binding protein, chloroplastic2.6e-155100Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1H7Y6 Chlorophyll a-b binding protein, chloroplastic6.4e-14693.04Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MATQALVSSSLTSSVGAAR RFG +P  GSS K ASFVVRAEATPPVKQGANR LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        VINGR+AMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLE+FLGGSG+PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGPLFNPLGFGKDEKS+KDLKLKEVKNGRLAMLAILG F+QGLVTGVGPYQNLLDHLSDP+NNN+LTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

SwissProt top hitse value%identityAlignment
P27521 Chlorophyll a-b binding protein 4, chloroplastic4.1e-4145.56Show/hide
Query:  SFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGVVGAIAPEILGSLGL
        S GSS K++SF V A      K+G     W     S  YL GSL GD GFDPLGL+ DPE        KW    E++NGR+AMLGV G + PE+   +G+
Subjt:  SFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGVVGAIAPEILGSLGL

Query:  I-PPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMG-----KQYFLGLEKFLGGSGEPAYPGGPLFNPLGFGKDEKSLK
        I  PE    W+       AG   Y+A   TLFV E  L  + E RR+QD  NPGS+      KQY L         GE  YPGG +FNPL F   +++  
Subjt:  I-PPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMG-----KQYFLGLEKFLGGSGEPAYPGGPLFNPLGFGKDEKSLK

Query:  DLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVL
          K KE+ NGRLAMLA LGF VQ  VTG GP++NLL HLSDP +N ++
Subjt:  DLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVL

P27522 Chlorophyll a-b binding protein 8, chloroplastic3.0e-13285.04Show/hide
Query:  MATQALV-SSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG
        MATQAL+ SSS+++S  AAR   G+R S   +RK ASFVVRA +TPPVKQGANRQLWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYG
Subjt:  MATQALV-SSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYG

Query:  EVINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPA
        EVINGR+AMLG  GAIAPEILG  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEK LGGSG+PA
Subjt:  EVINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPA

Query:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILG+F+Q LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q32904 Chlorophyll a-b binding protein 3, chloroplastic1.3e-12783.45Show/hide
Query:  MATQALV-SSSLTSSVGAARHRFGAR---PSFGSSRKSASFVVRAEATPPVKQ-GANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKW
        MATQALV SSSLT +  A R  F AR    S G SRK    +VRA ATPPVKQ G +R LWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+W
Subjt:  MATQALV-SSSLTSSVGAARHRFGAR---PSFGSSRKSASFVVRAEATPPVKQ-GANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKW

Query:  LAYGEVINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGS
        LAYGEVINGR+AMLG VGAIAPE LG +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDWA PGSMGKQYFLGLEK  GGS
Subjt:  LAYGEVINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGS

Query:  GEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        G PAYPGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILG+F+QGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Subjt:  GEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic1.2e-4542.75Show/hide
Query:  RFGARPSFGSSRKSASFVV--RAEATPPVKQGAN------RQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGV
        R G    F   R+ AS V+  R  +      G N      R  W        YLDG+L GDYGFDPLGL  DPE        KW    E+++ R+AMLGV
Subjt:  RFGARPSFGSSRKSASFVV--RAEATPPVKQGAN------RQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGV

Query:  VGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGEPAYPGGPLFNP
         G +  ++L + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+ +PGS  K+  +F GLE  L G  EP YPGGPL NP
Subjt:  VGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGEPAYPGGPLFNP

Query:  LGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        LG  KD ++  D KLKE+KNGRLAM+A+LGFFVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  LGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

Q9SY97 Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic6.4e-13585.35Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MA QALVSSSLTSSV  AR  FG++P   +S+K +SFVV+A ATPPVKQGANR LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        +INGR+AMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILG+F+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 58.8e-4742.75Show/hide
Query:  RFGARPSFGSSRKSASFVV--RAEATPPVKQGAN------RQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGV
        R G    F   R+ AS V+  R  +      G N      R  W        YLDG+L GDYGFDPLGL  DPE        KW    E+++ R+AMLGV
Subjt:  RFGARPSFGSSRKSASFVV--RAEATPPVKQGAN------RQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGV

Query:  VGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGEPAYPGGPLFNP
         G +  ++L + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+ +PGS  K+  +F GLE  L G  EP YPGGPL NP
Subjt:  VGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGEPAYPGGPLFNP

Query:  LGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        LG  KD ++  D KLKE+KNGRLAM+A+LGFFVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  LGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G45474.2 photosystem I light harvesting complex gene 58.8e-4742.75Show/hide
Query:  RFGARPSFGSSRKSASFVV--RAEATPPVKQGAN------RQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGV
        R G    F   R+ AS V+  R  +      G N      R  W        YLDG+L GDYGFDPLGL  DPE        KW    E+++ R+AMLGV
Subjt:  RFGARPSFGSSRKSASFVV--RAEATPPVKQGAN------RQLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGV

Query:  VGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGEPAYPGGPLFNP
         G +  ++L + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R+ D+ +PGS  K+  +F GLE  L G  EP YPGGPL NP
Subjt:  VGAIAPEILGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQ--YFLGLEKFLGGSGEPAYPGGPLFNP

Query:  LGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL
        LG  KD ++  D KLKE+KNGRLAM+A+LGFFVQ  VT  GP  NL++HLS+P +  ++ +L
Subjt:  LGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSL

AT1G61520.1 photosystem I light harvesting complex gene 34.5e-13685.35Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MA QALVSSSLTSSV  AR  FG++P   +S+K +SFVV+A ATPPVKQGANR LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        +INGR+AMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILG+F+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

AT1G61520.2 photosystem I light harvesting complex gene 32.8e-10984.55Show/hide
Query:  QLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY
        ++W  S  S      SLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE+INGR+AMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD Y
Subjt:  QLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPY

Query:  TLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQN
        TLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG PAYPGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILG+F+QGLVTGVGPYQN
Subjt:  TLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQN

Query:  LLDHLSDPVNNNVLTSLKFH
        LLDHL+DPVNNNVLTSLKFH
Subjt:  LLDHLSDPVNNNVLTSLKFH

AT1G61520.3 photosystem I light harvesting complex gene 34.5e-13685.35Show/hide
Query:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE
        MA QALVSSSLTSSV  AR  FG++P   +S+K +SFVV+A ATPPVKQGANR LWFAS QSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGE
Subjt:  MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGE

Query:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY
        +INGR+AMLG  GAIAPEILG  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDW NPGSMGKQYFLGLEK L GSG PAY
Subjt:  VINGRYAMLGVVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAY

Query:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        PGGP FNPLGFGKDEKSLK+LKLKEVKNGRLAMLAILG+F+QGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  PGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTCAGGCACTTGTATCATCTTCTTTAACCTCTTCAGTTGGTGCAGCCAGACACAGATTTGGGGCAAGACCCTCCTTTGGATCCTCTAGAAAATCAGCTTCCTT
TGTTGTCAGAGCTGAAGCCACCCCTCCCGTTAAGCAAGGGGCAAATAGACAACTATGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTCCCAGGCGACT
ACGGATTCGATCCATTGGGGCTATCGGACCCAGAAGGAACCGGAGGGTTCATCGAGCCAAAATGGTTAGCCTACGGCGAGGTGATCAATGGGCGGTACGCGATGTTAGGA
GTAGTAGGAGCCATAGCCCCAGAGATCCTAGGATCCCTAGGGCTAATCCCCCCAGAAACAGCCCTCCCATGGTTCAAAACAGGAGTGATCCCTCCAGCAGGGACCTACAA
CTACTGGGCAGACCCCTACACTCTCTTTGTTTTCGAGATGGCCCTAATGGGCTTTGCAGAGCACAGAAGGTTCCAGGATTGGGCCAACCCAGGGTCCATGGGGAAGCAGT
ACTTCTTGGGCCTGGAGAAGTTCTTGGGTGGGTCAGGGGAGCCAGCATACCCTGGTGGGCCTCTGTTCAACCCATTAGGGTTTGGTAAAGATGAGAAGTCATTGAAGGAT
TTGAAGCTGAAGGAGGTGAAGAATGGGAGGCTGGCCATGTTGGCAATTTTGGGCTTCTTTGTACAGGGCCTTGTCACTGGTGTTGGGCCTTACCAAAACCTTTTGGACCA
CTTGTCTGACCCTGTCAACAACAATGTTTTGACAAGCCTTAAGTTCCAT
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTCAGGCACTTGTATCATCTTCTTTAACCTCTTCAGTTGGTGCAGCCAGACACAGATTTGGGGCAAGACCCTCCTTTGGATCCTCTAGAAAATCAGCTTCCTT
TGTTGTCAGAGCTGAAGCCACCCCTCCCGTTAAGCAAGGGGCAAATAGACAACTATGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTCCCAGGCGACT
ACGGATTCGATCCATTGGGGCTATCGGACCCAGAAGGAACCGGAGGGTTCATCGAGCCAAAATGGTTAGCCTACGGCGAGGTGATCAATGGGCGGTACGCGATGTTAGGA
GTAGTAGGAGCCATAGCCCCAGAGATCCTAGGATCCCTAGGGCTAATCCCCCCAGAAACAGCCCTCCCATGGTTCAAAACAGGAGTGATCCCTCCAGCAGGGACCTACAA
CTACTGGGCAGACCCCTACACTCTCTTTGTTTTCGAGATGGCCCTAATGGGCTTTGCAGAGCACAGAAGGTTCCAGGATTGGGCCAACCCAGGGTCCATGGGGAAGCAGT
ACTTCTTGGGCCTGGAGAAGTTCTTGGGTGGGTCAGGGGAGCCAGCATACCCTGGTGGGCCTCTGTTCAACCCATTAGGGTTTGGTAAAGATGAGAAGTCATTGAAGGAT
TTGAAGCTGAAGGAGGTGAAGAATGGGAGGCTGGCCATGTTGGCAATTTTGGGCTTCTTTGTACAGGGCCTTGTCACTGGTGTTGGGCCTTACCAAAACCTTTTGGACCA
CTTGTCTGACCCTGTCAACAACAATGTTTTGACAAGCCTTAAGTTCCAT
Protein sequenceShow/hide protein sequence
MATQALVSSSLTSSVGAARHRFGARPSFGSSRKSASFVVRAEATPPVKQGANRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLG
VVGAIAPEILGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGEPAYPGGPLFNPLGFGKDEKSLKD
LKLKEVKNGRLAMLAILGFFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH