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MS000532 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000532
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold64:66715..66852
RNA-Seq ExpressionMS000532
SyntenyMS000532
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262994.1 unnamed protein product [Prunus armeniaca]3.8e-0567.65Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP
        WRSL WGKELL +GL W VGNGESI V  ++W+P
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP

KAG5547882.1 hypothetical protein RHGRI_013532 [Rhododendron griersonianum]1.2e-0663.89Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNS
        WRS++WGKELL +GL W +GNGE+I V +D W+PNS
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNS

XP_022159001.1 uncharacterized protein LOC111025446 [Momordica charantia]2.6e-0658.97Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNSLGL
        WRSL+WG ELL  GL W +GNGE+++V RD W+PN   L
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNSLGL

XP_030483669.1 uncharacterized protein LOC115700241 [Cannabis sativa]2.9e-0564.71Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP
        WRS++WGKELLVQGL W VG GE+I+   D W+P
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP

XP_030486817.1 uncharacterized protein LOC115703723 [Cannabis sativa]7.7e-0661.11Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNS
        WRS++WG++LL  GL W VGNGE+I   +D WIPNS
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNS

TrEMBL top hitse value%identityAlignment
A0A6J1E2L3 uncharacterized protein LOC1110254461.3e-0658.97Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNSLGL
        WRSL+WG ELL  GL W +GNGE+++V RD W+PN   L
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNSLGL

A0A803NIX7 Uncharacterized protein1.1e-0548.84Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNSLGLSYQP
        WR+L+WG+E++V+G  W VG+GE I + +DRW+P    LS++P
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNSLGLSYQP

A0A803NWD5 Uncharacterized protein1.4e-0561.11Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNS
        WRS++WG++LLV GL W VG+GE+I+   D WIPNS
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNS

A0A803P8K3 Uncharacterized protein1.1e-0564.71Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP
        WRS++WGKELLVQGL W VG+GE+I+   D W+P
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP

A0A803QJN9 Uncharacterized protein1.4e-0564.71Show/hide
Query:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP
        WRS++WGKELLVQGL W VG GE+I+   D W+P
Subjt:  WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCGGAGTCTGATGTGGGGGAAGGAGCTGTTAGTTCAAGGGCTGGGTTGGCCAGTGGGAAATGGTGAAAGTATAAGTGTGGATAGAGATCGGTGGATTCCAAACAGTTT
GGGCTTATCTTATCAGCCTAGGAGACTG
mRNA sequenceShow/hide mRNA sequence
TGGCGGAGTCTGATGTGGGGGAAGGAGCTGTTAGTTCAAGGGCTGGGTTGGCCAGTGGGAAATGGTGAAAGTATAAGTGTGGATAGAGATCGGTGGATTCCAAACAGTTT
GGGCTTATCTTATCAGCCTAGGAGACTG
Protein sequenceShow/hide protein sequence
WRSLMWGKELLVQGLGWPVGNGESISVDRDRWIPNSLGLSYQPRRL