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MS000538 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000538
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionfasciclin-like arabinogalactan protein 17
Genome locationscaffold64:214820..214891
RNA-Seq ExpressionMS000538
SyntenyMS000538
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450315.1 PREDICTED: fasciclin-like arabinogalactan protein 17 [Cucumis melo]4.4e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
XP_022153226.1 fasciclin-like arabinogalactan protein 16 [Momordica charantia]4.4e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
XP_022932856.1 fasciclin-like arabinogalactan protein 17 [Cucurbita moschata]4.4e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
XP_022961096.1 fasciclin-like arabinogalactan protein 17 [Cucurbita moschata]4.4e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
XP_023006018.1 fasciclin-like arabinogalactan protein 17 [Cucurbita maxima]4.4e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
TrEMBL top hitse value%identityAlignment
A0A660KNH0 Uncharacterized protein2.1e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
A0A6J1DK04 fasciclin-like arabinogalactan protein 162.1e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
A0A6J1H9E1 fasciclin-like arabinogalactan protein 172.1e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
A0A6J1JKN8 fasciclin-like arabinogalactan protein 172.1e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
A0A6J1L3S2 fasciclin-like arabinogalactan protein 172.1e-05100Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVACRMLGAFGQDSHFTTCQ
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11700.1 FASCICLIN-like arabinogalactan protein 18 precursor4.0e-0469.57Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTC
        GKLLEVAC MLGA G+DS+ + C
Subjt:  GKLLEVACRMLGAFGQDSHFTTC
AT5G06390.1 FASCICLIN-like arabinogalactan protein 17 precursor1.4e-0466.67Show/hide
Query:  GKLLEVACRMLGAFGQDSHFTTCQ
        GKLLEVAC MLGAFG+D++ + C+
Subjt:  GKLLEVACRMLGAFGQDSHFTTCQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAAATTGCTTGAAGTGGCATGTCGGATGCTGGGAGCCTTTGGCCAGGATTCTCATTTCACAACCTGCCAA
mRNA sequenceShow/hide mRNA sequence
GGAAAATTGCTTGAAGTGGCATGTCGGATGCTGGGAGCCTTTGGCCAGGATTCTCATTTCACAACCTGCCAA
Protein sequenceShow/hide protein sequence
GKLLEVACRMLGAFGQDSHFTTCQ