CuGenDBv2

Gene ID	MS000545
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Histone deacetylase
Genome location	scaffold64:293645..296685
RNA-Seq Expression	MS000545
Synteny	MS000545
Gene Ontology terms	GO:0006325 - chromatin organization (biological process) GO:0009294 - DNA mediated transformation (biological process) GO:0009640 - photomorphogenesis (biological process) GO:0070932 - histone H3 deacetylation (biological process) GO:0005730 - nucleolus (cellular component) GO:0032041 - NAD-dependent histone deacetylase activity (H3-K14 specific) (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001876 - Zinc finger, RanBP2-type IPR023696 - Ureohydrolase domain superfamily IPR037138 - Histone deacetylase domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588228.1 Histone deacetylase 15, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-117

83.4

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MV E LQ+S LVDG+AEV+LQKQG++LP QILNGR GKSGSDR+S RP LD NCG+DNTG+ SYRDVPSS+NID+QPDT RKK+RQQREMTFQDM NN D
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVA HCDSCGEHRESGILKHGFFA   L +S  LEAELET +T KGMVSQVS  SNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASL+TAGIFPGRCYPIPAREITKEELE V +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

XP_022153227.1 histone deacetylase 15 isoform X1 [Momordica charantia]

1.4e-144

97.74

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

XP_022153231.1 histone deacetylase 15 isoform X2 [Momordica charantia]

1.3e-142

97.36

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSR KSRQQREMTFQDMINNWD
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

XP_022153232.1 histone deacetylase 15 isoform X3 [Momordica charantia]

8.6e-142

96.98

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKT  GMVSQVSLPSNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

XP_023531085.1 histone deacetylase 15 isoform X1 [Cucurbita pepo subsp. pepo]

3.3e-117

83.4

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MV E LQ+S LVDG+AEV+LQKQG++LP QILNGR GKSGSDR+S RP LD NCG+DNTG+ SYRDVPSS+NID+QPDT RKK+RQQREMTFQDM NN D
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVA HCDSCGEHRESGILKHGFFA   L +S  LEAELET +T KGMVSQVS  SNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASL+TAGIFPGRCYPIPAREITKEELE V +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DG81 Histone deacetylase

6.8e-145

97.74

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

A0A6J1DIC7 Histone deacetylase

4.1e-142

96.98

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKT  GMVSQVSLPSNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

A0A6J1DK09 Histone deacetylase

6.4e-143

97.36

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSR KSRQQREMTFQDMINNWD
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

A0A6J1EET5 Histone deacetylase

3.0e-116

82.64

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MV E LQ+S LVDG+AEV+LQKQG++LP QILNGR GKSGSDR+S RP LD NCG+DNTG+ SYRDVPSS+NID+QPDT RKK+RQQREMTFQDM NN D
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPL KLREIMKWFCTNCTMANLDVA HCDSCGEHRESGILKHGFFA   L +S  LEAELET +T KGMVSQVS   NSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASL+TAGIFPGRCYPIPAREITKEELE V +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

A0A6J1EHK5 Histone deacetylase

2.8e-114

82.26

Show/hide

Query:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD
        MV E LQ+S LVDG+AEV+LQKQG++LP QILNGR GKSGSDR+S RP LD NCG+DNTG+ SYRDVPSS+NID+QPDT R K+RQQREMTFQDM NN D
Subjt:  MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWD

Query:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF
        IFEDDDEDDDDDSDWEPL KLREIMKWFCTNCTMANLDVA HCDSCGEHRESGILKHGFFA   L +S  LEAELET +T KGMVSQVS   NSSTAIGF
Subjt:  IFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGF

Query:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA
        DERMLLHSEVEMKSHPHPERPDRLRAIAASL+TAGIFPGRCYPIPAREITKEELE V +    QA
Subjt:  DERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

SwissProt top hits

e value

%identity

Alignment

Q8GXJ1 Histone deacetylase 15

2.2e-52

57.14

Show/hide

Query:  SSLNIDMQPDTSRKKSRQQREMTFQDMINNWDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDS
        S+ +I++ P  S K++R  REMTF+D I   D   +DD+D+DDD DWEP+Q   E +KW C NCTM+N     HC  CGEH+ESGIL+HG+ ASP  +D+
Subjt:  SSLNIDMQPDTSRKKSRQQREMTFQDMINNWDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDS

Query:  NSLEAELETKKTGKGMVSQVSLPSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV
          +E E   +K G       S  + SSTA+GFDERMLLHSE E+K+ PHPERPDRLRAIAASL+TAG+FPGRC PI AREITK+EL+ V
Subjt:  NSLEAELETKKTGKGMVSQVSLPSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV

Arabidopsis top hits

e value

%identity

Alignment

AT3G18520.1 histone deacetylase 15

1.6e-53

57.14

Show/hide

Query:  SSLNIDMQPDTSRKKSRQQREMTFQDMINNWDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDS
        S+ +I++ P  S K++R  REMTF+D I   D   +DD+D+DDD DWEP+Q   E +KW C NCTM+N     HC  CGEH+ESGIL+HG+ ASP  +D+
Subjt:  SSLNIDMQPDTSRKKSRQQREMTFQDMINNWDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDS

Query:  NSLEAELETKKTGKGMVSQVSLPSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV
          +E E   +K G       S  + SSTA+GFDERMLLHSE E+K+ PHPERPDRLRAIAASL+TAG+FPGRC PI AREITK+EL+ V
Subjt:  NSLEAELETKKTGKGMVSQVSLPSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV

AT3G18520.2 histone deacetylase 15

1.6e-53

57.14

Show/hide

Query:  SSLNIDMQPDTSRKKSRQQREMTFQDMINNWDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDS
        S+ +I++ P  S K++R  REMTF+D I   D   +DD+D+DDD DWEP+Q   E +KW C NCTM+N     HC  CGEH+ESGIL+HG+ ASP  +D+
Subjt:  SSLNIDMQPDTSRKKSRQQREMTFQDMINNWDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDS

Query:  NSLEAELETKKTGKGMVSQVSLPSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV
          +E E   +K G       S  + SSTA+GFDERMLLHSE E+K+ PHPERPDRLRAIAASL+TAG+FPGRC PI AREITK+EL+ V
Subjt:  NSLEAELETKKTGKGMVSQVSLPSNSSTAIGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERV

AT4G09784.1 FUNCTIONS IN: molecular_function unknown

7.8e-16

82.22

Show/hide

Query:  EMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELE
        E+KSHPHPERPDRLRAIAASL TAG+FPGRC PI A EITK+EL+
Subjt:  EMKSHPHPERPDRLRAIAASLSTAGIFPGRCYPIPAREITKEELE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTTTAGAAACACTTCAAAAGAGTCGTTTGGTGGATGGAGATGCTGAAGTAAGTCTTCAAAAGCAAGGCGACAAACTCCCTTGTCAAATTTTGAATGGAAGATGTGG
AAAATCAGGCTCTGATAGAAACAGTGCTAGGCCTTGTTTAGACGATAACTGTGGAGAAGATAATACAGGCGTAACTTCTTATAGAGATGTACCAAGCAGCTTAAATATAG
ATATGCAACCTGATACTTCACGTAAGAAGTCGAGGCAGCAGAGAGAAATGACCTTCCAAGATATGATTAACAACTGGGACATCTTCGAGGATGATGATGAGGATGACGAT
GATGATAGTGACTGGGAACCTCTGCAGAAACTCAGGGAAATAATGAAGTGGTTTTGTACCAATTGTACCATGGCCAACCTTGATGTTGCTGCACACTGTGACTCATGTGG
AGAACACAGAGAATCTGGAATACTGAAGCATGGGTTTTTTGCTTCTCCAACTTTACAAGATTCAAATTCATTAGAGGCCGAGCTTGAAACTAAAAAAACCGGTAAAGGCA
TGGTTTCACAAGTATCATTGCCATCTAATAGTTCCACGGCAATTGGATTTGATGAGAGAATGTTGCTGCACTCAGAAGTTGAAATGAAGTCACACCCACATCCAGAAAGA
CCGGATCGTTTGAGAGCTATTGCTGCTAGCTTGTCTACAGCTGGAATTTTTCCTGGAAGATGCTATCCAATCCCGGCAAGAGAAATTACCAAAGAAGAACTTGAGAGGGT
AAGAAACTACATTTATTTTCAGGCA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVLETLQKSRLVDGDAEVSLQKQGDKLPCQILNGRCGKSGSDRNSARPCLDDNCGEDNTGVTSYRDVPSSLNIDMQPDTSRKKSRQQREMTFQDMINNWDIFEDDDEDDD
DDSDWEPLQKLREIMKWFCTNCTMANLDVAAHCDSCGEHRESGILKHGFFASPTLQDSNSLEAELETKKTGKGMVSQVSLPSNSSTAIGFDERMLLHSEVEMKSHPHPER
PDRLRAIAASLSTAGIFPGRCYPIPAREITKEELERVRNYIYFQA

MS000545 (gene) of Bitter gourd (TR) v1 genome