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MS000550 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000550
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionrho GTPase-activating protein 7
Genome locationscaffold64:402787..403287
RNA-Seq ExpressionMS000550
SyntenyMS000550
Gene Ontology termsGO:0007165 - signal transduction (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590158.1 Rho GTPase-activating protein 7, partial [Cucurbita argyrosperma subsp. sororia]2.4e-5792.91Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRNIKGQVLGSANS+K TPRKLFMDS+SPSDSKSTEVSTSMS+D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

XP_004139062.1 rho GTPase-activating protein 7 [Cucumis sativus]4.1e-5792.91Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRN+KGQVLGSANSSK TPRKLF+DSLSPSDSKSTEVSTSMS+D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

XP_022153213.1 rho GTPase-activating protein 7 [Momordica charantia]7.2e-62100Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

XP_022960980.1 rho GTPase-activating protein 7-like [Cucurbita moschata]2.4e-5792.91Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRNIKGQVLGSANS+K TPRKLFMDS+SPSDSKSTEVSTSMS+D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

XP_038878996.1 rho GTPase-activating protein 7 [Benincasa hispida]4.1e-5792.91Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRNIKGQVLGSANS+K TPRKLFMDSLSPSDSKSTEVSTS+S+D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

TrEMBL top hitse value%identityAlignment
A0A0A0M2Y0 Uncharacterized protein2.0e-5792.91Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRN+KGQVLGSANSSK TPRKLF+DSLSPSDSKSTEVSTSMS+D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

A0A1S3BNE6 rho GTPase-activating protein 74.4e-5792.13Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRNIKGQVLGSANS+K TPRKLF+DSLSPSDSKSTEVSTSM++D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

A0A6J1DGW4 rho GTPase-activating protein 73.5e-62100Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

A0A6J1HAM8 rho GTPase-activating protein 7-like1.2e-5792.91Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRNIKGQVLGSANS+K TPRKLFMDS+SPSDSKSTEVSTSMS+D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

A0A6J1JIF8 rho GTPase-activating protein 7-like4.4e-5792.13Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ
        MG DWRNIKGQVLGSANS+K TPRKLFMDS+SPSDSK TEVSTSMS+D+LAVDS SLPSTSKAGEVLDYTRH+ VPSSTLVELTTRLDFFKERRSQLMEQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQ

Query:  LHNLDLNYGASSSQDFIYKQPPSPPWK
        LHNLDLNYGASSSQDFIYKQPPSPPWK
Subjt:  LHNLDLNYGASSSQDFIYKQPPSPPWK

SwissProt top hitse value%identityAlignment
Q8RWQ4 Rho GTPase-activating protein 74.6e-2754.62Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR---HTAVPSSTLVELTTRLDFFKERRSQ
        +G +WRN KG       +S+Q  RK   +S + +DSK +E S  +S+D L ++DS S+PSTS+  ++ +Y R    +A  S+ LVELTTRLDFFKERRSQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR---HTAVPSSTLVELTTRLDFFKERRSQ

Query:  LMEQLHNLDLNYGASSSQDFIYKQPPSPPW
        LMEQL NLDLNYG SSSQDFI++ P SPPW
Subjt:  LMEQLHNLDLNYGASSSQDFIYKQPPSPPW

Q9FMP8 Rho GTPase-activating protein 66.4e-1365.08Show/hide
Query:  VLDYTRHTAVP--SSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGASSSQDFIYKQPPSPPW
        V+DY RH   P  S+ L+ELTTRLDFFKERRSQLMEQ+ NLDLNYG+SSS      +  SPPW
Subjt:  VLDYTRHTAVP--SSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGASSSQDFIYKQPPSPPW

Arabidopsis top hitse value%identityAlignment
AT5G12150.1 Rho GTPase activation protein (RhoGAP) with PH domain4.5e-1465.08Show/hide
Query:  VLDYTRHTAVP--SSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGASSSQDFIYKQPPSPPW
        V+DY RH   P  S+ L+ELTTRLDFFKERRSQLMEQ+ NLDLNYG+SSS      +  SPPW
Subjt:  VLDYTRHTAVP--SSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGASSSQDFIYKQPPSPPW

AT5G19390.1 Rho GTPase activation protein (RhoGAP) with PH domain3.2e-2854.62Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR---HTAVPSSTLVELTTRLDFFKERRSQ
        +G +WRN KG       +S+Q  RK   +S + +DSK +E S  +S+D L ++DS S+PSTS+  ++ +Y R    +A  S+ LVELTTRLDFFKERRSQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR---HTAVPSSTLVELTTRLDFFKERRSQ

Query:  LMEQLHNLDLNYGASSSQDFIYKQPPSPPW
        LMEQL NLDLNYG SSSQDFI++ P SPPW
Subjt:  LMEQLHNLDLNYGASSSQDFIYKQPPSPPW

AT5G19390.2 Rho GTPase activation protein (RhoGAP) with PH domain3.2e-2854.62Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR---HTAVPSSTLVELTTRLDFFKERRSQ
        +G +WRN KG       +S+Q  RK   +S + +DSK +E S  +S+D L ++DS S+PSTS+  ++ +Y R    +A  S+ LVELTTRLDFFKERRSQ
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR---HTAVPSSTLVELTTRLDFFKERRSQ

Query:  LMEQLHNLDLNYGASSSQDFIYKQPPSPPW
        LMEQL NLDLNYG SSSQDFI++ P SPPW
Subjt:  LMEQLHNLDLNYGASSSQDFIYKQPPSPPW

AT5G19390.3 Rho GTPase activation protein (RhoGAP) with PH domain1.1e-0441.67Show/hide
Query:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR
        +G +WRN KG       +S+Q  RK   +S + +DSK +E S  +S+D L ++DS S+PSTS+   VLD T+
Subjt:  MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDL-AVDSGSLPSTSKAGEVLDYTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGACTGGCGAAATATCAAAGGACAAGTGTTAGGATCTGCAAATAGCAGCAAGCAGACGCCACGGAAGCTATTTATGGATTCATTAAGCCCAAGCGACTCCAA
AAGTACCGAGGTTTCGACTAGCATGTCCATGGATGACCTTGCAGTTGATTCTGGTTCTTTGCCTTCTACTTCAAAAGCAGGAGAGGTTTTGGATTACACGAGACACACGG
CAGTGCCTTCCTCGACATTGGTAGAGTTAACAACACGACTCGATTTCTTCAAGGAGAGACGTTCTCAGTTGATGGAGCAGCTCCATAATCTTGATTTAAATTATGGTGCA
TCATCCTCACAAGACTTTATCTATAAACAACCGCCGTCTCCGCCATGGAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTGACTGGCGAAATATCAAAGGACAAGTGTTAGGATCTGCAAATAGCAGCAAGCAGACGCCACGGAAGCTATTTATGGATTCATTAAGCCCAAGCGACTCCAA
AAGTACCGAGGTTTCGACTAGCATGTCCATGGATGACCTTGCAGTTGATTCTGGTTCTTTGCCTTCTACTTCAAAAGCAGGAGAGGTTTTGGATTACACGAGACACACGG
CAGTGCCTTCCTCGACATTGGTAGAGTTAACAACACGACTCGATTTCTTCAAGGAGAGACGTTCTCAGTTGATGGAGCAGCTCCATAATCTTGATTTAAATTATGGTGCA
TCATCCTCACAAGACTTTATCTATAAACAACCGCCGTCTCCGCCATGGAAA
Protein sequenceShow/hide protein sequence
MGGDWRNIKGQVLGSANSSKQTPRKLFMDSLSPSDSKSTEVSTSMSMDDLAVDSGSLPSTSKAGEVLDYTRHTAVPSSTLVELTTRLDFFKERRSQLMEQLHNLDLNYGA
SSSQDFIYKQPPSPPWK